RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 CPXCR1Q8N123 301 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 NFATC2IPQ8NCF5 419 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PNMA1Q8ND90 353 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PPHLN1Q8NEY8 458 aaKnown RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 TATDN2Q93075 761 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 E2F7Q96AV8 911 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 CDCA7LQ96GN5 454 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PHOX2BQ99453 314 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 SELENOOQ9BVL4 669 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PRR14Q9BWN1 585 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 LGR6Q9HBX8 967 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 FANCLQ9NW38 375 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 TOR4AQ9NXH8 423 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 VTI1BQ9UEU0 232 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 EVLQ9UI08 416 aaPredicted RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 FAM170AA1A519 330 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L15C9J2P7 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L10C9JJH3 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L13C9JLJ4 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L12C9JPN9 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L11C9JVI0 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L21D6R901 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L18D6R9N7 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L22D6RA61 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L17D6RBQ6 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L19D6RCP7 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L20D6RJB6 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 TLL1O43897 1013 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 DIAPH1O60610 1272 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 PRPF40AO75400 957 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 ALDH1L1O75891 902 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 FOSL1P15407 271 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 KCNA2P16389 499 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 RRM1P23921 792 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 DDIT3P35638 169 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 GJA5P36382 358 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 DAB2P98082 770 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 USP17L24Q0WX57 530 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 SEPT2Q15019 361 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 SLFNL1Q499Z3 407 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 BRDTQ58F21 947 aaPredicted RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 KLHL10Q6JEL2 608 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 KRT26Q7Z3Y9 468 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 LRP10Q7Z4F1 713 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 KIAA0907Q7Z7F0 614 aaPredicted RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 HOMER1Q86YM7 354 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 SLF2Q8IX21 1173 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 RAVER1Q8IY67 606 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 PGBD3Q8N328 593 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 KIAA1958Q8N8K9 716 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 ATRIPQ8WXE1 791 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 KIFC2Q96AC6 838 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 PAWRQ96IZ0 340 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 PAIP2Q9BPZ3 127 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 TSPY26PQ9H489 355 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 RBM28Q9NW13 759 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 NXF1Q9UBU9 619 aaKnown RBP4.22□□□□□ -1.73
FXN-204ENST00000484259 HDAC9Q9UKV0 1011 aa4.22□□□□□ -1.73
FXN-204ENST00000484259 NUTM2BA6NNL0 878 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 NUTM2EB1AL46 878 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 ALG1L2C9J202 215 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 PPFIA3O75145 1194 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 HCLS1P14317 486 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 ATF3P18847 181 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 ATF4P18848 351 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 PSMA3P25788 255 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 SLC4A3P48751 1232 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 ZNF131P52739 623 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 PRSS12P56730 875 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 FKBP4Q02790 459 aaKnown RBP eCLIP4.21□□□□□ -1.74
FXN-204ENST00000484259 CBLBQ13191 982 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 ZNF211Q13398 564 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 PDE1CQ14123 709 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 TTF1Q15361 905 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 SLC4A8Q2Y0W8 1093 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 Q3C1V9 767 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 NUTM2DQ5VT03 806 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 PRPF38BQ5VTL8 546 aaKnown RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 BLOC1S3Q6QNY0 202 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 KSR2Q6VAB6 950 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 NUTM2AQ8IVF1 878 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 PLEKHM2Q8IWE5 1019 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 MYO1HQ8N1T3 1032 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 TMEM151AQ8N4L1 468 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 HELQQ8TDG4 1101 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 RPGRQ92834 1020 aaKnown RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 SKA1Q96BD8 255 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 FAM161BQ96MY7 647 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 GPR101Q96P66 508 aaPredicted RBP4.21□□□□□ -1.74
FXN-204ENST00000484259 IWS1Q96ST2 819 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 CSRNP2Q9H175 543 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 TMCC3Q9ULS5 477 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 SMC3Q9UQE7 1217 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 ATP8A1Q9Y2Q0 1164 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 SLC45A1Q9Y2W3 748 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 UNC13AQ9UPW8 1703 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 WASHC2AQ641Q2 1341 aa4.21□□□□□ -1.74
FXN-204ENST00000484259 USP17L3A6NCW0 530 aa4.2□□□□□ -1.74
FXN-204ENST00000484259 USP17L4A6NCW7 530 aa4.2□□□□□ -1.74
FXN-204ENST00000484259 TRIM64CA6NLI5 447 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms