RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ME3Q16798 604 aa13.52□□□□□ -0.24
SEC61A1-205ENST00000483956 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.24
SEC61A1-205ENST00000483956 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.24
SEC61A1-205ENST00000483956 ADCY9O60503 1353 aa13.52□□□□□ -0.25
SEC61A1-205ENST00000483956 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
SEC61A1-205ENST00000483956 KRT85P78386 507 aa13.52□□□□□ -0.25
SEC61A1-205ENST00000483956 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
SEC61A1-205ENST00000483956 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
SEC61A1-205ENST00000483956 PDCP20941 246 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 LMAN1P49257 510 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 DTNBO60941 627 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 NLRP6P59044 892 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 PI4KAP1Q8N8J0 262 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 ALDH8A1Q9H2A2 487 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
SEC61A1-205ENST00000483956 HIP1O00291 1037 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 SASH3O75995 380 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 NOM1Q5C9Z4 860 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 SLIT1O75093 1534 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 MAGEA9P43362 315 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 CCAR2Q8N163 923 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 CREB3L3Q68CJ9 461 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
SEC61A1-205ENST00000483956 LTN1O94822 1766 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 PSMA5P28066 241 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 AK7Q96M32 723 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 DONSONQ9NYP3 566 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 SMC1AQ14683 1233 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-205ENST00000483956 JCADQ9P266 1359 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 EIF2S2P20042 333 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 LIG1P18858 919 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 ACTN2P35609 894 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 CCZ1BP86790 482 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 CCZ1P86791 482 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 TBX22Q9Y458 520 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 TBC1D8O95759 1140 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
SEC61A1-205ENST00000483956 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 ANKRD65E5RJM6 399 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 CCDC91Q7Z6B0 441 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 IQUBQ8NA54 791 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 ADAM21Q9UKJ8 722 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 SUFUQ9UMX1 484 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 SLC27A2O14975 620 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 USP16Q9Y5T5 823 aa13.47□□□□□ -0.25
SEC61A1-205ENST00000483956 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 UBXN4Q92575 508 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 TNMDQ9H2S6 317 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 CLSTN2Q9H4D0 955 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 MRC1P22897 1456 aa13.46□□□□□ -0.25
SEC61A1-205ENST00000483956 ZNF165P49910 485 aa13.46□□□□□ -0.26
SEC61A1-205ENST00000483956 GSCP56915 257 aaPredicted RBP13.46□□□□□ -0.26
SEC61A1-205ENST00000483956 EXOC4Q96A65 974 aa13.46□□□□□ -0.26
SEC61A1-205ENST00000483956 FAM212AQ96EL1 285 aa13.46□□□□□ -0.26
SEC61A1-205ENST00000483956 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.26
SEC61A1-205ENST00000483956 NEMFO60524 1076 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 CDC25BP30305 580 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 AACSQ86V21 672 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms