RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
CLK3-204ENST00000483723 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
CLK3-204ENST00000483723 SPEF2Q9C093 1822 aa17.02■□□□□ 0.32
CLK3-204ENST00000483723 CASZ1Q86V15 1759 aa17.02■□□□□ 0.31
CLK3-204ENST00000483723 RAD50Q92878 1312 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 PLSCR1O15162 318 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 HSPA4P34932 840 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 RFC4P35249 363 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 FSD1Q9BTV5 496 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
CLK3-204ENST00000483723 FGFR2P21802 821 aa17■□□□□ 0.31
CLK3-204ENST00000483723 MCCP23508 829 aa17■□□□□ 0.31
CLK3-204ENST00000483723 ADORA1P30542 326 aa17■□□□□ 0.31
CLK3-204ENST00000483723 HSCBQ8IWL3 235 aa17■□□□□ 0.31
CLK3-204ENST00000483723 KBTBD3Q8NAB2 608 aa17■□□□□ 0.31
CLK3-204ENST00000483723 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
CLK3-204ENST00000483723 ZNF512BQ96KM6 892 aaPredicted RBP17■□□□□ 0.31
CLK3-204ENST00000483723 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
CLK3-204ENST00000483723 TXNRD1Q16881 649 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
CLK3-204ENST00000483723 SSFA2P28290 1259 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
CLK3-204ENST00000483723 ARAP2Q8WZ64 1704 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
CLK3-204ENST00000483723 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
CLK3-204ENST00000483723 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 KCNB2Q92953 911 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 MPHOSPH8Q99549 860 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 PAG1Q9NWQ8 432 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
CLK3-204ENST00000483723 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
CLK3-204ENST00000483723 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
CLK3-204ENST00000483723 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
CLK3-204ENST00000483723 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
CLK3-204ENST00000483723 ANTXR1Q9H6X2 564 aa16.97■□□□□ 0.31
CLK3-204ENST00000483723 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
CLK3-204ENST00000483723 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
CLK3-204ENST00000483723 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
CLK3-204ENST00000483723 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
CLK3-204ENST00000483723 PTH1RQ03431 593 aa16.96■□□□□ 0.31
CLK3-204ENST00000483723 NFIXQ14938 502 aa16.96■□□□□ 0.31
CLK3-204ENST00000483723 PUM3Q15397 648 aaKnown RBP16.96■□□□□ 0.31
CLK3-204ENST00000483723 LPIN2Q92539 896 aa16.96■□□□□ 0.31
CLK3-204ENST00000483723 COL4A1P02462 1669 aa16.96■□□□□ 0.31
CLK3-204ENST00000483723 PHF14O94880 888 aa16.96■□□□□ 0.3
CLK3-204ENST00000483723 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.3
CLK3-204ENST00000483723 TTC39AQ5SRH9 613 aa16.96■□□□□ 0.3
CLK3-204ENST00000483723 GORABQ5T7V8 394 aa16.96■□□□□ 0.3
CLK3-204ENST00000483723 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.3
CLK3-204ENST00000483723 MAP4K1Q92918 833 aa16.96■□□□□ 0.3
CLK3-204ENST00000483723 NLRP3Q96P20 1036 aa16.96■□□□□ 0.3
CLK3-204ENST00000483723 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
CLK3-204ENST00000483723 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
CLK3-204ENST00000483723 GOLIM4O00461 696 aa16.95■□□□□ 0.3
CLK3-204ENST00000483723 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
CLK3-204ENST00000483723 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
CLK3-204ENST00000483723 GYS1P13807 737 aa16.94■□□□□ 0.3
CLK3-204ENST00000483723 TM4SF1P30408 202 aa16.94■□□□□ 0.3
CLK3-204ENST00000483723 HELBQ8NG08 1087 aaPredicted RBP16.94■□□□□ 0.3
CLK3-204ENST00000483723 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLK3-204ENST00000483723 BSDC1Q9NW68 430 aaPredicted RBP16.94■□□□□ 0.3
CLK3-204ENST00000483723 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
CLK3-204ENST00000483723 ARID4AP29374 1257 aaPredicted RBP16.93■□□□□ 0.3
CLK3-204ENST00000483723 SCARF1Q14162 830 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 ANKRD18AQ8IVF6 992 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 TAF1P21675 1872 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 APBA3O96018 575 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 UQCRFS1P1P0C7P4 283 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 SLC5A1P13866 664 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 CHRNDQ07001 517 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
CLK3-204ENST00000483723 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
CLK3-204ENST00000483723 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
CLK3-204ENST00000483723 TNS1Q9HBL0 1735 aaKnown RBP16.92■□□□□ 0.3
CLK3-204ENST00000483723 ST18O60284 1047 aa16.92■□□□□ 0.3
CLK3-204ENST00000483723 TAF5LO75529 589 aa16.92■□□□□ 0.3
CLK3-204ENST00000483723 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
CLK3-204ENST00000483723 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
CLK3-204ENST00000483723 RNF113AO15541 343 aaKnown RBP16.91■□□□□ 0.3
CLK3-204ENST00000483723 DDIT3P35638 169 aa16.91■□□□□ 0.3
CLK3-204ENST00000483723 MCAMP43121 646 aa16.91■□□□□ 0.3
CLK3-204ENST00000483723 ZAP70P43403 619 aa16.91■□□□□ 0.3
CLK3-204ENST00000483723 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
CLK3-204ENST00000483723 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
CLK3-204ENST00000483723 CHGBP05060 677 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 PHKA1P46020 1223 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
CLK3-204ENST00000483723 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLK3-204ENST00000483723 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 264.3 ms