RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 CREB3L3Q68CJ9 461 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 AFF2P51816 1311 aa15.92■□□□□ 0.14
CPNE1-225ENST00000483495 GOLIM4O00461 696 aa15.92■□□□□ 0.14
CPNE1-225ENST00000483495 ADORA1P30542 326 aa15.92■□□□□ 0.14
CPNE1-225ENST00000483495 NUCB2P80303 420 aa15.92■□□□□ 0.14
CPNE1-225ENST00000483495 ZSWIM6Q9HCJ5 1215 aa15.92■□□□□ 0.14
CPNE1-225ENST00000483495 NIP7Q9Y221 180 aaKnown RBP eCLIP15.92■□□□□ 0.14
CPNE1-225ENST00000483495 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 TSGA10IPQ3SY00 556 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 MCMDC2Q4G0Z9 681 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 ZGPATQ8N5A5 531 aaKnown RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 BTAF1O14981 1849 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 RPAP1Q9BWH6 1393 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 SLC27A2O14975 620 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
CPNE1-225ENST00000483495 HELLSQ9NRZ9 838 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 HMG20BQ9P0W2 317 aa15.91■□□□□ 0.14
CPNE1-225ENST00000483495 LAMB2P55268 1798 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 DDX11L8A8MPP1 907 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 PDE8BO95263 885 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 CASTP20810 708 aaKnown RBP15.9■□□□□ 0.14
CPNE1-225ENST00000483495 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 TTC39AQ5SRH9 613 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 RNF20Q5VTR2 975 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 GBP4Q96PP9 640 aa15.9■□□□□ 0.14
CPNE1-225ENST00000483495 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-225ENST00000483495 MROH5Q6ZUA9 1318 aa15.89■□□□□ 0.13
CPNE1-225ENST00000483495 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
CPNE1-225ENST00000483495 KCNJ4P48050 445 aa15.89■□□□□ 0.13
CPNE1-225ENST00000483495 ZMYM1Q5SVZ6 1142 aa15.89■□□□□ 0.13
CPNE1-225ENST00000483495 GORABQ5T7V8 394 aa15.89■□□□□ 0.13
CPNE1-225ENST00000483495 VPS53Q5VIR6 699 aa15.89■□□□□ 0.13
CPNE1-225ENST00000483495 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 SSFA2P28290 1259 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 AK2P54819 239 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 CCDC152Q4G0S7 254 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
CPNE1-225ENST00000483495 SCN7AQ01118 1682 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
CPNE1-225ENST00000483495 CHGBP05060 677 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 FGFR2P21802 821 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 PSMA5P28066 241 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 KCNQ4P56696 695 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 GSE1Q14687 1217 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 RUFY3Q7L099 469 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 SEC62Q99442 399 aaKnown RBP15.88■□□□□ 0.13
CPNE1-225ENST00000483495 LIMCH1Q9UPQ0 1083 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
CPNE1-225ENST00000483495 LRRFIP1Q32MZ4 808 aaKnown RBP15.87■□□□□ 0.13
CPNE1-225ENST00000483495 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
CPNE1-225ENST00000483495 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-225ENST00000483495 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 SCARF1Q14162 830 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 PUM3Q15397 648 aaKnown RBP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 CCDC129Q6ZRS4 1044 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 LY75O60449 1722 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 ZFYP08048 801 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 FAM182BQ5T319 152 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-225ENST00000483495 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 LPIN2Q92539 896 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
CPNE1-225ENST00000483495 CPA1P15085 419 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 PTMSP20962 102 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-225ENST00000483495 PKP1Q13835 747 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 KRT32Q14532 448 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 NOL8Q76FK4 1167 aaKnown RBP15.85■□□□□ 0.13
CPNE1-225ENST00000483495 SEC31BQ9NQW1 1179 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 ZDHHC9Q9Y397 364 aa15.85■□□□□ 0.13
CPNE1-225ENST00000483495 MCAMP43121 646 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 ZAP70P43403 619 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
CPNE1-225ENST00000483495 SLC10A5Q5PT55 438 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-225ENST00000483495 MPHOSPH8Q99549 860 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 ARAP2Q8WZ64 1704 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 MAST3O60307 1309 aa15.84■□□□□ 0.13
CPNE1-225ENST00000483495 GNPATO15228 680 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 BAG4O95429 457 aaKnown RBP15.83■□□□□ 0.12
CPNE1-225ENST00000483495 UQCRFS1P1P0C7P4 283 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
CPNE1-225ENST00000483495 SLFNL1Q499Z3 407 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 BLOC1S2Q6QNY1 142 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms