RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 MAP2K1Q02750 393 aaPredicted RBP25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 CST9Q5W186 159 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 PI4KAP1Q8N8J0 262 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 TRPM4Q8TD43 1214 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 ZC3H12CQ9C0D7 883 aaKnown RBP25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 MRS2Q9HD23 443 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 PRDM10Q9NQV6 1147 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 ANKIB1Q9P2G1 1089 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 TLL2Q9Y6L7 1015 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 SCN9AQ15858 1988 aa25.02■■□□□ 1.6
R3HDM1-215ENST00000483021 SPEF2Q9C093 1822 aa25.01■■□□□ 1.59
R3HDM1-215ENST00000483021 ANP32CO43423 234 aa25.01■■□□□ 1.59
R3HDM1-215ENST00000483021 GGA1Q9UJY5 639 aa25.01■■□□□ 1.59
R3HDM1-215ENST00000483021 UFL1O94874 794 aa25■■□□□ 1.59
R3HDM1-215ENST00000483021 HIRAP54198 1017 aaPredicted RBP25■■□□□ 1.59
R3HDM1-215ENST00000483021 PAXIP1Q6ZW49 1069 aaPredicted RBP25■■□□□ 1.59
R3HDM1-215ENST00000483021 CDC37L1Q7L3B6 337 aa25■■□□□ 1.59
R3HDM1-215ENST00000483021 ANKRD18AQ8IVF6 992 aa25■■□□□ 1.59
R3HDM1-215ENST00000483021 CAPNS2Q96L46 248 aa25■■□□□ 1.59
R3HDM1-215ENST00000483021 GLIS2Q9BZE0 524 aaPredicted RBP25■■□□□ 1.59
R3HDM1-215ENST00000483021 ZBTB12Q9Y330 459 aaPredicted RBP25■■□□□ 1.59
R3HDM1-215ENST00000483021 IGKV5-2P06315 115 aa24.99■■□□□ 1.59
R3HDM1-215ENST00000483021 CTSWP56202 376 aa24.99■■□□□ 1.59
R3HDM1-215ENST00000483021 DOK7Q18PE1 504 aa24.99■■□□□ 1.59
R3HDM1-215ENST00000483021 JARID2Q92833 1246 aaPredicted RBP24.99■■□□□ 1.59
R3HDM1-215ENST00000483021 CDC5LQ99459 802 aaKnown RBP24.99■■□□□ 1.59
R3HDM1-215ENST00000483021 RTL9Q8NET4 1388 aa24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 XDHP47989 1333 aa24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 G3V3G9 751 aa24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 CELF2O95319 508 aaKnown RBP24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 DCAF8Q5TAQ9 597 aa24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 GPR101Q96P66 508 aaPredicted RBP24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 CCDC85AQ96PX6 553 aaPredicted RBP24.98■■□□□ 1.59
R3HDM1-215ENST00000483021 SHTN1A0MZ66 631 aa24.97■■□□□ 1.59
R3HDM1-215ENST00000483021 ZNF609O15014 1411 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 FANCIQ9NVI1 1328 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 NEURL1BA8MQ27 555 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 SLC4A2P04920 1241 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 CYP4F22Q6NT55 531 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 SAPCD2Q86UD0 394 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 HHIPL1Q96JK4 782 aa24.96■■□□□ 1.59
R3HDM1-215ENST00000483021 POLR2AP24928 1970 aaKnown RBP24.95■■□□□ 1.58
R3HDM1-215ENST00000483021 ZNF316A6NFI3 1004 aaPredicted RBP24.95■■□□□ 1.58
R3HDM1-215ENST00000483021 CAPN15O75808 1086 aa24.95■■□□□ 1.58
R3HDM1-215ENST00000483021 CWF19L2Q2TBE0 894 aaKnown RBP24.95■■□□□ 1.58
R3HDM1-215ENST00000483021 SAMD7Q7Z3H4 446 aa24.95■■□□□ 1.58
R3HDM1-215ENST00000483021 VIL1P09327 827 aaKnown RBP24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 FLIIQ13045 1269 aa24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 TBC1D10BQ4KMP7 808 aaPredicted RBP24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 G2E3Q7L622 706 aa24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 WDR63Q8IWG1 891 aa24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 TTLL11Q8NHH1 800 aa24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 KCNQ5Q9NR82 932 aa24.94■■□□□ 1.58
R3HDM1-215ENST00000483021 ATP2B4P23634 1241 aa24.93■■□□□ 1.58
R3HDM1-215ENST00000483021 GRM1Q13255 1194 aa24.93■■□□□ 1.58
R3HDM1-215ENST00000483021 BEGAINQ9BUH8 593 aa24.93■■□□□ 1.58
R3HDM1-215ENST00000483021 ZNF408Q9H9D4 720 aa24.93■■□□□ 1.58
R3HDM1-215ENST00000483021 MAP2K2P36507 400 aa24.92■■□□□ 1.58
R3HDM1-215ENST00000483021 LBX1P52954 281 aa24.92■■□□□ 1.58
R3HDM1-215ENST00000483021 GREM2Q9H772 168 aa24.92■■□□□ 1.58
R3HDM1-215ENST00000483021 BSDC1Q9NW68 430 aaPredicted RBP24.92■■□□□ 1.58
R3HDM1-215ENST00000483021 HSPA8P11142 646 aaKnown RBP24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 FKBP5Q13451 457 aaPredicted RBP24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 KIF4BQ2VIQ3 1234 aa24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 UBE3BQ7Z3V4 1068 aa24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 MYH16Q9H6N6 1097 aa24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 MED23Q9ULK4 1368 aa24.91■■□□□ 1.58
R3HDM1-215ENST00000483021 H7C1W4 665 aa24.9■■□□□ 1.58
R3HDM1-215ENST00000483021 KRT26Q7Z3Y9 468 aa24.9■■□□□ 1.58
R3HDM1-215ENST00000483021 USP48Q86UV5 1035 aa24.9■■□□□ 1.58
R3HDM1-215ENST00000483021 AGBL3Q8NEM8 1001 aa24.9■■□□□ 1.58
R3HDM1-215ENST00000483021 DCPSQ96C86 337 aaKnown RBP24.9■■□□□ 1.58
R3HDM1-215ENST00000483021 EGFRP00533 1210 aa24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 GCKRQ14397 625 aa24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 RSBN1LQ6PCB5 846 aaPredicted RBP24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 PODNQ7Z5L7 613 aa24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 DNAAF4Q8WXU2 420 aa24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 PLA2G12BQ9BX93 195 aa24.89■■□□□ 1.58
R3HDM1-215ENST00000483021 RBM26Q5T8P6 1007 aaKnown RBP24.88■■□□□ 1.57
R3HDM1-215ENST00000483021 LINS1Q8NG48 757 aa24.88■■□□□ 1.57
R3HDM1-215ENST00000483021 MINPP1Q9UNW1 487 aa24.88■■□□□ 1.57
R3HDM1-215ENST00000483021 VAMP4O75379 141 aa24.87■■□□□ 1.57
R3HDM1-215ENST00000483021 IGHMBP2P38935 993 aaKnown RBP24.87■■□□□ 1.57
R3HDM1-215ENST00000483021 SALL2Q9Y467 1007 aaPredicted RBP24.87■■□□□ 1.57
R3HDM1-215ENST00000483021 USP17L3A6NCW0 530 aa24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 USP17L4A6NCW7 530 aa24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 AOC2O75106 756 aa24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 ZNF280AP59817 542 aaPredicted RBP24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 USP17L1Q7RTZ2 530 aa24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 ZNF646O15015 1829 aaPredicted RBP24.86■■□□□ 1.57
R3HDM1-215ENST00000483021 CCT4P50991 539 aaKnown RBP24.85■■□□□ 1.57
R3HDM1-215ENST00000483021 EXOSC9Q06265 439 aaKnown RBP24.85■■□□□ 1.57
R3HDM1-215ENST00000483021 SULF1Q8IWU6 871 aa24.85■■□□□ 1.57
R3HDM1-215ENST00000483021 GGA3Q9NZ52 723 aa24.85■■□□□ 1.57
R3HDM1-215ENST00000483021 CA12O43570 354 aa24.84■■□□□ 1.57
R3HDM1-215ENST00000483021 BRPF1P55201 1214 aaPredicted RBP24.84■■□□□ 1.57
R3HDM1-215ENST00000483021 CASP7P55210 303 aa24.84■■□□□ 1.57
R3HDM1-215ENST00000483021 HUNKP57058 714 aa24.84■■□□□ 1.57
R3HDM1-215ENST00000483021 LEMD3Q9Y2U8 911 aa24.84■■□□□ 1.57
R3HDM1-215ENST00000483021 ADM5C9JUS6 153 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms