RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 G3V3G9 751 aa29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 IGHMBP2P38935 993 aaKnown RBP29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 GMPSP49915 693 aaPredicted RBP29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 FAM161AQ3B820 660 aa29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 DCAF8Q5TAQ9 597 aa29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 DIEXFQ68CQ4 756 aaKnown RBP29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 ZC3H12CQ9C0D7 883 aaKnown RBP29.84■■■□□ 2.37
RHBDF1-208ENST00000482904 YDJCA8MPS7 323 aa29.83■■■□□ 2.37
RHBDF1-208ENST00000482904 ECE2O60344 883 aa29.83■■■□□ 2.37
RHBDF1-208ENST00000482904 ITGA6P23229 1130 aa29.83■■■□□ 2.37
RHBDF1-208ENST00000482904 GPRC5DQ9NZD1 345 aa29.83■■■□□ 2.37
RHBDF1-208ENST00000482904 ADAMTSL1Q8N6G6 1762 aa29.82■■■□□ 2.36
RHBDF1-208ENST00000482904 DOK7Q18PE1 504 aa29.82■■■□□ 2.36
RHBDF1-208ENST00000482904 MRPL50Q8N5N7 158 aaKnown RBP29.82■■■□□ 2.36
RHBDF1-208ENST00000482904 SRCIN1Q9C0H9 1055 aa29.82■■■□□ 2.36
RHBDF1-208ENST00000482904 BSDC1Q9NW68 430 aaPredicted RBP29.82■■■□□ 2.36
RHBDF1-208ENST00000482904 C9orf78Q9NZ63 289 aaPredicted RBP29.81■■■□□ 2.36
RHBDF1-208ENST00000482904 CHMP3Q9Y3E7 222 aa29.81■■■□□ 2.36
RHBDF1-208ENST00000482904 SPEF2Q9C093 1822 aa29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 GRM8O00222 908 aa29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 ALDH1L1O75891 902 aa29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 ATP2B4P23634 1241 aa29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 MAP1SQ66K74 1059 aaPredicted RBP29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 USP50Q70EL3 339 aaPredicted RBP29.8■■■□□ 2.36
RHBDF1-208ENST00000482904 PTPRCP08575 1304 aa29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 DNAJC5GQ8N7S2 189 aa29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 SSH1Q8WYL5 1049 aa29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 KLRG1Q96E93 195 aa29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 MPHOSPH8Q99549 860 aa29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 ADARB2Q9NS39 739 aaKnown RBP29.79■■■□□ 2.36
RHBDF1-208ENST00000482904 ANKRD18BA2A2Z9 1011 aa29.77■■■□□ 2.36
RHBDF1-208ENST00000482904 PSMD14O00487 310 aa29.77■■■□□ 2.36
RHBDF1-208ENST00000482904 CSF1RP07333 972 aa29.77■■■□□ 2.36
RHBDF1-208ENST00000482904 SMC4Q9NTJ3 1288 aa29.77■■■□□ 2.36
RHBDF1-208ENST00000482904 MINPP1Q9UNW1 487 aa29.77■■■□□ 2.36
RHBDF1-208ENST00000482904 PASKQ96RG2 1323 aa29.76■■■□□ 2.36
RHBDF1-208ENST00000482904 CNTROBQ8N137 903 aa29.76■■■□□ 2.35
RHBDF1-208ENST00000482904 IFIT5Q13325 482 aaKnown RBP29.75■■■□□ 2.35
RHBDF1-208ENST00000482904 ALDH1L2Q3SY69 923 aa29.75■■■□□ 2.35
RHBDF1-208ENST00000482904 MIER1Q8N108 512 aa29.75■■■□□ 2.35
RHBDF1-208ENST00000482904 CREBZFQ9NS37 354 aa29.75■■■□□ 2.35
RHBDF1-208ENST00000482904 ZBTB12Q9Y330 459 aaPredicted RBP29.75■■■□□ 2.35
RHBDF1-208ENST00000482904 FOXO4P98177 505 aa29.74■■■□□ 2.35
RHBDF1-208ENST00000482904 ITGBL1O95965 494 aaPredicted RBP29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 CCT4P50991 539 aaKnown RBP29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 MICALL2Q8IY33 904 aa29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 TRMT2AQ8IZ69 625 aaKnown RBP29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 CNOT7Q9UIV1 285 aaKnown RBP29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
RHBDF1-208ENST00000482904 H7C1D1 291 aa29.72■■■□□ 2.35
RHBDF1-208ENST00000482904 CT47B1P0C2W7 299 aaPredicted RBP29.72■■■□□ 2.35
RHBDF1-208ENST00000482904 TAF7LQ5H9L4 462 aa29.72■■■□□ 2.35
RHBDF1-208ENST00000482904 LMBR1LQ6UX01 489 aa29.72■■■□□ 2.35
RHBDF1-208ENST00000482904 ANKRD2Q9GZV1 360 aa29.72■■■□□ 2.35
RHBDF1-208ENST00000482904 RPS12P25398 132 aaKnown RBP29.71■■■□□ 2.35
RHBDF1-208ENST00000482904 KCNJ4P48050 445 aa29.71■■■□□ 2.35
RHBDF1-208ENST00000482904 KCNQ5Q9NR82 932 aa29.71■■■□□ 2.35
RHBDF1-208ENST00000482904 CCDC57Q2TAC2 916 aa29.7■■■□□ 2.35
RHBDF1-208ENST00000482904 DPF2Q92785 391 aa29.7■■■□□ 2.35
RHBDF1-208ENST00000482904 TMEM88BA6NKF7 163 aa29.69■■■□□ 2.34
RHBDF1-208ENST00000482904 EPHA10Q5JZY3 1008 aa29.69■■■□□ 2.34
RHBDF1-208ENST00000482904 TRPM4Q8TD43 1214 aa29.69■■■□□ 2.34
RHBDF1-208ENST00000482904 LEMD3Q9Y2U8 911 aa29.69■■■□□ 2.34
RHBDF1-208ENST00000482904 SHTN1A0MZ66 631 aa29.68■■■□□ 2.34
RHBDF1-208ENST00000482904 SUCLG2Q96I99 432 aa29.68■■■□□ 2.34
RHBDF1-208ENST00000482904 WTIPA6NIX2 430 aaPredicted RBP29.67■■■□□ 2.34
RHBDF1-208ENST00000482904 CHRNDQ07001 517 aa29.67■■■□□ 2.34
RHBDF1-208ENST00000482904 ZNF804BA4D1E1 1349 aa29.67■■■□□ 2.34
RHBDF1-208ENST00000482904 NBPF7P0C2Y1 421 aaPredicted RBP29.66■■■□□ 2.34
RHBDF1-208ENST00000482904 PODNQ7Z5L7 613 aa29.66■■■□□ 2.34
RHBDF1-208ENST00000482904 MKRN1Q9UHC7 482 aaKnown RBP29.66■■■□□ 2.34
RHBDF1-208ENST00000482904 VIL1P09327 827 aaKnown RBP29.65■■■□□ 2.34
RHBDF1-208ENST00000482904 TBC1D10BQ4KMP7 808 aaPredicted RBP29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 JMYQ8N9B5 988 aa29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 FBXW7Q969H0 707 aa29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 CNNM1Q9NRU3 951 aa29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 SCN9AQ15858 1988 aa29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 UTYO14607 1347 aa29.64■■■□□ 2.34
RHBDF1-208ENST00000482904 HNRNPUQ00839 825 aaKnown RBP eCLIP29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 RSBN1LQ6PCB5 846 aaPredicted RBP29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 SAMD7Q7Z3H4 446 aa29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 ZC3H15Q8WU90 426 aaKnown RBP29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 ZNF594Q96JF6 807 aaPredicted RBP29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 COA1Q9GZY4 146 aa29.63■■■□□ 2.33
RHBDF1-208ENST00000482904 USP17L3A6NCW0 530 aa29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 USP17L4A6NCW7 530 aa29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 TRAF5O00463 557 aa29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 HIRAP54198 1017 aaPredicted RBP29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 RBM26Q5T8P6 1007 aaKnown RBP29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 LDHAL6AQ6ZMR3 332 aa29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 USP17L1Q7RTZ2 530 aa29.62■■■□□ 2.33
RHBDF1-208ENST00000482904 KLRK1P26718 216 aa29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 AGBL3Q8NEM8 1001 aa29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 HELBQ8NG08 1087 aaPredicted RBP29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 BICC1Q9H694 974 aaKnown RBP29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 ABT1Q9ULW3 272 aaKnown RBP29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 CNTNAP1P78357 1384 aa29.61■■■□□ 2.33
RHBDF1-208ENST00000482904 TAF5LO75529 589 aa29.6■■■□□ 2.33
RHBDF1-208ENST00000482904 KIF4BQ2VIQ3 1234 aa29.6■■■□□ 2.33
RHBDF1-208ENST00000482904 TXNRD3Q86VQ6 643 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms