RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 EHD4Q9H223 541 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 ABCB6Q9NP58 842 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 SOBPA7XYQ1 873 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 EDN3P14138 238 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 ARID5AQ03989 594 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 PAK2Q13177 524 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 MCF2L2Q86YR7 1114 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 TCF12Q99081 682 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 TRIM56Q9BRZ2 755 aaKnown RBP10.02□□□□□ -0.81
SEC22A-207ENST00000481965 NOC4LQ9BVI4 516 aaKnown RBP10.02□□□□□ -0.81
SEC22A-207ENST00000481965 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 PCDHGC4Q9Y5F7 938 aa10.02□□□□□ -0.81
SEC22A-207ENST00000481965 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
SEC22A-207ENST00000481965 FGRP09769 529 aa10.01□□□□□ -0.81
SEC22A-207ENST00000481965 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
SEC22A-207ENST00000481965 GTF2F1P35269 517 aaKnown RBP eCLIP10.01□□□□□ -0.81
SEC22A-207ENST00000481965 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
SEC22A-207ENST00000481965 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
SEC22A-207ENST00000481965 TTF2Q9UNY4 1162 aaKnown RBP10.01□□□□□ -0.81
SEC22A-207ENST00000481965 SLC35F4A4IF30 521 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 SMARCA5O60264 1052 aaPredicted RBP10□□□□□ -0.81
SEC22A-207ENST00000481965 KIF4AO95239 1232 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 RARAP10276 462 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 FCGRTP55899 365 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 FIGNL1Q6PIW4 674 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 TRAK1Q9UPV9 953 aa10□□□□□ -0.81
SEC22A-207ENST00000481965 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 PHF20L1A8MW92 1017 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 F6X3S4 739 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 BNIP3LO60238 219 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
SEC22A-207ENST00000481965 NFKB1P19838 968 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 DBN1Q16643 649 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 RIPOR1Q6ZS17 1223 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 ANKRD24Q8TF21 1146 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 SLC30A3Q99726 388 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 OXCT2Q9BYC2 517 aaPredicted RBP9.99□□□□□ -0.81
SEC22A-207ENST00000481965 TLR7Q9NYK1 1049 aaKnown RBP9.99□□□□□ -0.81
SEC22A-207ENST00000481965 ADAMTS1Q9UHI8 967 aa9.99□□□□□ -0.81
SEC22A-207ENST00000481965 AXIN1O15169 862 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 TRPA1O75762 1119 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 DGAT1O75907 488 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 HOXD8P13378 290 aaPredicted RBP9.98□□□□□ -0.81
SEC22A-207ENST00000481965 SOX18P35713 384 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 PTSQ03393 145 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 RBL2Q08999 1139 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 CCNJLQ8IV13 435 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 GPRASP2Q96D09 838 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 SPATA32Q96LK8 384 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 NUCKS1Q9H1E3 243 aaKnown RBP9.98□□□□□ -0.81
SEC22A-207ENST00000481965 LIN7BQ9HAP6 207 aa9.98□□□□□ -0.81
SEC22A-207ENST00000481965 MAN1A2O60476 641 aa9.97□□□□□ -0.81
SEC22A-207ENST00000481965 FBXO24O75426 580 aa9.97□□□□□ -0.81
SEC22A-207ENST00000481965 RASGRP4Q8TDF6 673 aa9.97□□□□□ -0.81
SEC22A-207ENST00000481965 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.97□□□□□ -0.81
SEC22A-207ENST00000481965 NFKBIEO00221 500 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 SPEM2Q0P670 501 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.82
SEC22A-207ENST00000481965 RAB44Q7Z6P3 723 aaPredicted RBP9.96□□□□□ -0.82
SEC22A-207ENST00000481965 CEP120Q8N960 986 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 HHIPQ96QV1 700 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 OSMRQ99650 979 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 MARK1Q9P0L2 795 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
SEC22A-207ENST00000481965 RGS20O76081 388 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 MAP3K6O95382 1288 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 GRIA4P48058 902 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 ABHD17AQ96GS6 310 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 DZANK1Q9NVP4 752 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 PPP4R2Q9NY27 417 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 AKAP2Q9Y2D5 859 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 CADPSQ9ULU8 1353 aa9.95□□□□□ -0.82
SEC22A-207ENST00000481965 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 PSAPP07602 524 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 XRCC5P13010 732 aaKnown RBP9.94□□□□□ -0.82
SEC22A-207ENST00000481965 CD33P20138 364 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 PKDCCQ504Y2 493 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 NCAPG2Q86XI2 1143 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
SEC22A-207ENST00000481965 MINDY4BA8MYZ0 360 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 HYAL2Q12891 473 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 SPRED3Q2MJR0 410 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 DTHD1Q6ZMT9 781 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 DHX32Q7L7V1 743 aaKnown RBP9.93□□□□□ -0.82
SEC22A-207ENST00000481965 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 BHMTQ93088 406 aa9.93□□□□□ -0.82
SEC22A-207ENST00000481965 EAF1Q96JC9 268 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms