RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 NBPF6Q5VWK0 638 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 IER5Q5VY09 327 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 SUSD3Q96L08 255 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 NBPF4Q96M43 638 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 BCO2Q9BYV7 579 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 KBTBD4Q9NVX7 518 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 GADD45BO75293 160 aaPredicted RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 POLR3DP05423 398 aaPredicted RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 SEC16BQ96JE7 1060 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 SPON2Q9BUD6 331 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 ELP3Q9H9T3 547 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 USP20Q9Y2K6 914 aa7.65□□□□□ -1.18
COPA-203ENST00000481040 MRPL42Q9Y6G3 142 aaKnown RBP7.65□□□□□ -1.18
COPA-203ENST00000481040 UBAP1LF5GYI3 381 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 CLSTN1O94985 981 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 SSBP05455 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
COPA-203ENST00000481040 HSD3B2P26439 372 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 ARSDP51689 593 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 SERINC3Q13530 473 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 TRIP4Q15650 581 aaPredicted RBP7.64□□□□□ -1.19
COPA-203ENST00000481040 NBPF1Q3BBV0 1214 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 C4orf17Q53FE4 359 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 PRICKLE2Q7Z3G6 844 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 GALNT12Q8IXK2 581 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 CMTR1Q8N1G2 835 aaKnown RBP7.64□□□□□ -1.19
COPA-203ENST00000481040 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 KLRG1Q96E93 195 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 ZDHHC3Q9NYG2 299 aa7.64□□□□□ -1.19
COPA-203ENST00000481040 RTCBQ9Y3I0 505 aaKnown RBP7.64□□□□□ -1.19
COPA-203ENST00000481040 XRCC5P13010 732 aaKnown RBP7.63□□□□□ -1.19
COPA-203ENST00000481040 INPP5BP32019 993 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
COPA-203ENST00000481040 GAS6Q14393 721 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 PTPROQ16827 1216 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 NBPF10Q6P3W6 841 aaKnown RBP7.63□□□□□ -1.19
COPA-203ENST00000481040 LYSMD3Q7Z3D4 306 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 MKL1Q969V6 931 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 HSH2DQ96JZ2 352 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 GRIP2Q9C0E4 1043 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 TMEM63CQ9P1W3 806 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 GPC6Q9Y625 555 aaPredicted RBP7.63□□□□□ -1.19
COPA-203ENST00000481040 KCNMB2Q9Y691 235 aa7.63□□□□□ -1.19
COPA-203ENST00000481040 GSTT1P30711 240 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 NASPP49321 788 aaPredicted RBP7.62□□□□□ -1.19
COPA-203ENST00000481040 GRM2Q14416 872 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 SV2AQ7L0J3 742 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 SUV39H2Q9H5I1 410 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 ZNF408Q9H9D4 720 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 ANKIB1Q9P2G1 1089 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 ADAMTS1Q9UHI8 967 aa7.62□□□□□ -1.19
COPA-203ENST00000481040 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
COPA-203ENST00000481040 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 TATP17735 454 aaPredicted RBP7.61□□□□□ -1.19
COPA-203ENST00000481040 GPC1P35052 558 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 PWP1Q13610 501 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 RELL1Q8IUW5 271 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 KCNB2Q92953 911 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 CHRDQ9H2X0 955 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
COPA-203ENST00000481040 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 EREGO14944 169 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 IGBP1P78318 339 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 BTLAQ7Z6A9 289 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 C1orf127Q8N9H9 656 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 SIRPGQ9P1W8 387 aa7.6□□□□□ -1.19
COPA-203ENST00000481040 MINDY4BA8MYZ0 360 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 MARCH6O60337 910 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 RAB11FIP3O75154 756 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 ETFBP38117 255 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 BICDL1Q6ZP65 573 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 ANKS3Q6ZW76 656 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
COPA-203ENST00000481040 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 CNTN3Q9P232 1028 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 EFR3BQ9Y2G0 817 aa7.59□□□□□ -1.19
COPA-203ENST00000481040 F6X3S4 739 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 GPR25O00155 361 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 ENPP3O14638 875 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 IBSPP21815 317 aaPredicted RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 GBP2P32456 591 aaPredicted RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 EIF4A3P38919 411 aaKnown RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 PHKA2P46019 1235 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 POU4F2Q12837 409 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 DBN1Q16643 649 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 RNF187Q5TA31 235 aaPredicted RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 LYPD4Q6UWN0 246 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 C3orf58Q8NDZ4 430 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 MICAL1Q8TDZ2 1067 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms