RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 KIF1BPQ96EK5 621 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 COL15A1P39059 1388 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 N4BP2Q86UW6 1770 aaPredicted RBP7.54□□□□□ -1.2
LRRC47-203ENST00000479239 PCCAP05165 728 aaPredicted RBP7.53□□□□□ -1.2
LRRC47-203ENST00000479239 FOXK1P85037 733 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 FOXO4P98177 505 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 ZNF827Q17R98 1081 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 RABL6Q3YEC7 729 aaPredicted RBP7.53□□□□□ -1.2
LRRC47-203ENST00000479239 RC3H1Q5TC82 1133 aaKnown RBP7.53□□□□□ -1.2
LRRC47-203ENST00000479239 LMBR1LQ6UX01 489 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 NLRP10Q86W26 655 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 ZNF34Q8IZ26 560 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
LRRC47-203ENST00000479239 FAM89AQ96GI7 184 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 IL1RAPL2Q9NP60 686 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 PA2G4Q9UQ80 394 aaKnown RBP7.53□□□□□ -1.2
LRRC47-203ENST00000479239 CHMP3Q9Y3E7 222 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
LRRC47-203ENST00000479239 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.2
LRRC47-203ENST00000479239 TRIM66O15016 1216 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 GALR2O43603 387 aaPredicted RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 RPS6KA4O75676 772 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 CAMTA2O94983 1202 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 MX1P20591 662 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 ANP32AP39687 249 aaKnown RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 PDE1AP54750 535 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 TTC22Q5TAA0 569 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 NUTM1Q86Y26 1132 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 CLASRPQ8N2M8 674 aaKnown RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 IL27Q8NEV9 243 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 KLHDC4Q8TBB5 520 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 SIL1Q9H173 461 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 KDM4CQ9H3R0 1056 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 OSBPL3Q9H4L5 887 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 STAP2Q9UGK3 403 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 TRMT112Q9UI30 125 aaKnown RBP7.52□□□□□ -1.21
LRRC47-203ENST00000479239 ZNF652Q9Y2D9 606 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 TJP1Q07157 1748 aa7.52□□□□□ -1.21
LRRC47-203ENST00000479239 GNPATO15228 680 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 CDC45O75419 566 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 SEC24BO95487 1268 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 IFIT2P09913 472 aaKnown RBP7.51□□□□□ -1.21
LRRC47-203ENST00000479239 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
LRRC47-203ENST00000479239 PDE4DQ08499 809 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 PARP10Q53GL7 1025 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 UTP14AQ9BVJ6 771 aaKnown RBP7.51□□□□□ -1.21
LRRC47-203ENST00000479239 PLA2G12BQ9BX93 195 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 RTCBQ9Y3I0 505 aaKnown RBP7.51□□□□□ -1.21
LRRC47-203ENST00000479239 ARFGEF2Q9Y6D5 1785 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 SALL3Q9BXA9 1300 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 CDHR2Q9BYE9 1310 aa7.51□□□□□ -1.21
LRRC47-203ENST00000479239 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 IRS4O14654 1257 aaPredicted RBP7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SASH1O94885 1247 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 CSF1RP07333 972 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 GSPT1P15170 499 aaKnown RBP7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SDSP20132 328 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 POLD1P28340 1107 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 HTRA3P83110 453 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 CCDC57Q2TAC2 916 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SUSD4Q5VX71 490 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 TSHZ3Q63HK5 1081 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 CLEC4GQ6UXB4 293 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 AACSQ86V21 672 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 PLPP6Q8IY26 295 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SYNE4Q8N205 404 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 PDCD7Q8N8D1 485 aaKnown RBP7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SLC16A10Q8TF71 515 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 GPATCH3Q96I76 525 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 DAXXQ9UER7 740 aaPredicted RBP7.5□□□□□ -1.21
LRRC47-203ENST00000479239 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 NIP7Q9Y221 180 aaKnown RBP eCLIP7.5□□□□□ -1.21
LRRC47-203ENST00000479239 BTAF1O14981 1849 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 AOX1Q06278 1338 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 UBN2Q6ZU65 1347 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 SH3TC1Q8TE82 1336 aa7.5□□□□□ -1.21
LRRC47-203ENST00000479239 EYA2O00167 538 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 GPR37O15354 613 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 PDE8AO60658 829 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 EIF5BO60841 1220 aaKnown RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 ZPR1O75312 459 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 HSP90B1P14625 803 aaKnown RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 HMGB2P26583 209 aaKnown RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 IL15P40933 162 aaPredicted RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 TFCP2Q12800 502 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 IFIT5Q13325 482 aaKnown RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 SLC27A3Q5K4L6 730 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 TRAPPC3LQ5T215 181 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 CASC1Q6TDU7 716 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 TBC1D9Q6ZT07 1266 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 HOMEZQ8IX15 550 aa7.49□□□□□ -1.21
LRRC47-203ENST00000479239 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
LRRC47-203ENST00000479239 ECHDC1Q9NTX5 307 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms