RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 RABL6Q3YEC7 729 aaPredicted RBP25.69■■□□□ 1.7
VARS-224ENST00000479051 NIM1KQ8IY84 436 aa25.69■■□□□ 1.7
VARS-224ENST00000479051 GGA1Q9UJY5 639 aa25.69■■□□□ 1.7
VARS-224ENST00000479051 GLTPD2A6NH11 291 aa25.68■■□□□ 1.7
VARS-224ENST00000479051 TNNQ9UQP3 1299 aa25.68■■□□□ 1.7
VARS-224ENST00000479051 SPEF2Q9C093 1822 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 UFL1O94874 794 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 KIAA2012Q0VF49 1180 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 AOC3Q16853 763 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 WASHC4Q2M389 1173 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 TMEM57Q8N5G2 664 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 ANKRD2Q9GZV1 360 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 MINPP1Q9UNW1 487 aa25.67■■□□□ 1.7
VARS-224ENST00000479051 ATP2B4P23634 1241 aa25.66■■□□□ 1.7
VARS-224ENST00000479051 ANKRD44Q8N8A2 993 aa25.66■■□□□ 1.7
VARS-224ENST00000479051 TBC1D16Q8TBP0 767 aa25.66■■□□□ 1.7
VARS-224ENST00000479051 MEIS3Q99687 375 aa25.66■■□□□ 1.7
VARS-224ENST00000479051 EIF6P56537 245 aaKnown RBP25.65■■□□□ 1.7
VARS-224ENST00000479051 LDHAL6AQ6ZMR3 332 aa25.65■■□□□ 1.7
VARS-224ENST00000479051 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.65■■□□□ 1.7
VARS-224ENST00000479051 POLLQ9UGP5 575 aa25.65■■□□□ 1.7
VARS-224ENST00000479051 DUOX1Q9NRD9 1551 aa25.65■■□□□ 1.7
VARS-224ENST00000479051 FZD9O00144 591 aa25.64■■□□□ 1.7
VARS-224ENST00000479051 ZC3H12CQ9C0D7 883 aaKnown RBP25.64■■□□□ 1.7
VARS-224ENST00000479051 CNNM1Q9NRU3 951 aa25.64■■□□□ 1.7
VARS-224ENST00000479051 LRRFIP2Q9Y608 721 aaKnown RBP25.64■■□□□ 1.7
VARS-224ENST00000479051 LTBP1Q14766 1721 aa25.63■■□□□ 1.69
VARS-224ENST00000479051 ITPRIPQ8IWB1 547 aa25.63■■□□□ 1.69
VARS-224ENST00000479051 ZNF594Q96JF6 807 aaPredicted RBP25.62■■□□□ 1.69
VARS-224ENST00000479051 ZNRF3Q9ULT6 936 aa25.62■■□□□ 1.69
VARS-224ENST00000479051 LEMD3Q9Y2U8 911 aa25.62■■□□□ 1.69
VARS-224ENST00000479051 G3V3G9 751 aa25.61■■□□□ 1.69
VARS-224ENST00000479051 RIMBP2O15034 1052 aa25.61■■□□□ 1.69
VARS-224ENST00000479051 KCNJ4P48050 445 aa25.61■■□□□ 1.69
VARS-224ENST00000479051 CHRNDQ07001 517 aa25.61■■□□□ 1.69
VARS-224ENST00000479051 DCAF8Q5TAQ9 597 aa25.61■■□□□ 1.69
VARS-224ENST00000479051 GNAI2P04899 355 aa25.6■■□□□ 1.69
VARS-224ENST00000479051 ZNF541Q9H0D2 1346 aa25.6■■□□□ 1.69
VARS-224ENST00000479051 RLBP1P12271 317 aa25.59■■□□□ 1.69
VARS-224ENST00000479051 COL4A5P29400 1685 aa25.58■■□□□ 1.69
VARS-224ENST00000479051 DDNO94850 711 aaPredicted RBP25.58■■□□□ 1.69
VARS-224ENST00000479051 GPC2Q8N158 579 aa25.58■■□□□ 1.69
VARS-224ENST00000479051 NMRK2Q9NPI5 230 aa25.58■■□□□ 1.69
VARS-224ENST00000479051 PANK1Q8TE04 598 aa25.57■■□□□ 1.68
VARS-224ENST00000479051 GPR101Q96P66 508 aaPredicted RBP25.57■■□□□ 1.68
VARS-224ENST00000479051 RRAGCQ9HB90 399 aa25.57■■□□□ 1.68
VARS-224ENST00000479051 ZNF804BA4D1E1 1349 aa25.57■■□□□ 1.68
VARS-224ENST00000479051 MED23Q9ULK4 1368 aa25.56■■□□□ 1.68
VARS-224ENST00000479051 VEGFAP15692 232 aaPredicted RBP25.56■■□□□ 1.68
VARS-224ENST00000479051 C16orf71Q8IYS4 520 aaPredicted RBP25.56■■□□□ 1.68
VARS-224ENST00000479051 GJA3Q9Y6H8 435 aa25.56■■□□□ 1.68
VARS-224ENST00000479051 MROH5Q6ZUA9 1318 aa25.56■■□□□ 1.68
VARS-224ENST00000479051 IQCA1LA6NCM1 817 aa25.55■■□□□ 1.68
VARS-224ENST00000479051 PLIN1O60240 522 aa25.55■■□□□ 1.68
VARS-224ENST00000479051 TNIP1Q15025 636 aa25.55■■□□□ 1.68
VARS-224ENST00000479051 DBNDD1Q9H9R9 158 aa25.55■■□□□ 1.68
VARS-224ENST00000479051 WDR90Q96KV7 1748 aa25.54■■□□□ 1.68
VARS-224ENST00000479051 ECE2O60344 883 aa25.54■■□□□ 1.68
VARS-224ENST00000479051 TAF5LO75529 589 aa25.54■■□□□ 1.68
VARS-224ENST00000479051 DOK7Q18PE1 504 aa25.54■■□□□ 1.68
VARS-224ENST00000479051 CIAPIN1Q6FI81 312 aa25.54■■□□□ 1.68
VARS-224ENST00000479051 HELBQ8NG08 1087 aaPredicted RBP25.54■■□□□ 1.68
VARS-224ENST00000479051 L3MBTL3Q96JM7 780 aaPredicted RBP25.54■■□□□ 1.68
VARS-224ENST00000479051 PUS3Q9BZE2 481 aaKnown RBP25.54■■□□□ 1.68
VARS-224ENST00000479051 CHMP4BQ9H444 224 aaKnown RBP25.54■■□□□ 1.68
VARS-224ENST00000479051 KIF3CO14782 793 aa25.53■■□□□ 1.68
VARS-224ENST00000479051 CXCL9Q07325 125 aa25.53■■□□□ 1.68
VARS-224ENST00000479051 METTL24Q5JXM2 366 aa25.53■■□□□ 1.68
VARS-224ENST00000479051 FBXO3Q9UK99 471 aa25.53■■□□□ 1.68
VARS-224ENST00000479051 RIPOR2Q9Y4F9 1068 aa25.53■■□□□ 1.68
VARS-224ENST00000479051 ZBTB7BO15156 539 aaPredicted RBP25.52■■□□□ 1.68
VARS-224ENST00000479051 SRGAP3O43295 1099 aa25.52■■□□□ 1.68
VARS-224ENST00000479051 RFX5P48382 616 aaPredicted RBP25.52■■□□□ 1.68
VARS-224ENST00000479051 MTX1Q13505 466 aa25.52■■□□□ 1.68
VARS-224ENST00000479051 PDE3AQ14432 1141 aa25.52■■□□□ 1.68
VARS-224ENST00000479051 KLHDC4Q8TBB5 520 aa25.52■■□□□ 1.68
VARS-224ENST00000479051 EYA2O00167 538 aa25.51■■□□□ 1.67
VARS-224ENST00000479051 RAD17O75943 681 aa25.51■■□□□ 1.67
VARS-224ENST00000479051 PTPN12Q05209 780 aaKnown RBP25.51■■□□□ 1.67
VARS-224ENST00000479051 MVPQ14764 893 aaKnown RBP25.51■■□□□ 1.67
VARS-224ENST00000479051 DDX19BQ9UMR2 479 aa25.51■■□□□ 1.67
VARS-224ENST00000479051 YDJCA8MPS7 323 aa25.5■■□□□ 1.67
VARS-224ENST00000479051 LMOD1P29536 600 aaPredicted RBP25.5■■□□□ 1.67
VARS-224ENST00000479051 UBE4AQ14139 1066 aa25.5■■□□□ 1.67
VARS-224ENST00000479051 LRRC24Q50LG9 513 aa25.5■■□□□ 1.67
VARS-224ENST00000479051 PODNQ7Z5L7 613 aa25.5■■□□□ 1.67
VARS-224ENST00000479051 COA1Q9GZY4 146 aa25.5■■□□□ 1.67
VARS-224ENST00000479051 A0A1B0GUL6 1792 aa25.49■■□□□ 1.67
VARS-224ENST00000479051 CIAO1O76071 339 aa25.49■■□□□ 1.67
VARS-224ENST00000479051 COPRSQ9NQ92 184 aa25.49■■□□□ 1.67
VARS-224ENST00000479051 HACL1Q9UJ83 578 aa25.49■■□□□ 1.67
VARS-224ENST00000479051 COG6Q9Y2V7 657 aa25.49■■□□□ 1.67
VARS-224ENST00000479051 WTIPA6NIX2 430 aaPredicted RBP25.48■■□□□ 1.67
VARS-224ENST00000479051 C15orf52Q6ZUT6 534 aaKnown RBP25.48■■□□□ 1.67
VARS-224ENST00000479051 SIL1Q9H173 461 aa25.48■■□□□ 1.67
VARS-224ENST00000479051 SCN4AP35499 1836 aa25.47■■□□□ 1.67
VARS-224ENST00000479051 TOMM70O94826 608 aa25.47■■□□□ 1.67
VARS-224ENST00000479051 POTECB2RU33 542 aa25.46■■□□□ 1.67
VARS-224ENST00000479051 PDE8BO95263 885 aa25.46■■□□□ 1.67
VARS-224ENST00000479051 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms