RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 TNIP1Q15025 636 aa20.31■□□□□ 0.84
CYTH3-206ENST00000478541 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
CYTH3-206ENST00000478541 GGA1Q9UJY5 639 aa20.31■□□□□ 0.84
CYTH3-206ENST00000478541 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
CYTH3-206ENST00000478541 GRM8O00222 908 aa20.3■□□□□ 0.84
CYTH3-206ENST00000478541 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
CYTH3-206ENST00000478541 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 UFL1O94874 794 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 ITGA6P23229 1130 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 FOXO4P98177 505 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 EAPPQ56P03 285 aaPredicted RBP20.29■□□□□ 0.84
CYTH3-206ENST00000478541 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 DNAJC5GQ8N7S2 189 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 GPRC5DQ9NZD1 345 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 PSME4Q14997 1843 aa20.29■□□□□ 0.84
CYTH3-206ENST00000478541 RAD17O75943 681 aa20.28■□□□□ 0.84
CYTH3-206ENST00000478541 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
CYTH3-206ENST00000478541 EPS15P42566 896 aa20.28■□□□□ 0.84
CYTH3-206ENST00000478541 FAM161AQ3B820 660 aa20.28■□□□□ 0.84
CYTH3-206ENST00000478541 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
CYTH3-206ENST00000478541 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
CYTH3-206ENST00000478541 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
CYTH3-206ENST00000478541 SCN9AQ15858 1988 aa20.27■□□□□ 0.84
CYTH3-206ENST00000478541 ECE2O60344 883 aa20.27■□□□□ 0.84
CYTH3-206ENST00000478541 ATP2B4P23634 1241 aa20.27■□□□□ 0.84
CYTH3-206ENST00000478541 GPR101Q96P66 508 aaPredicted RBP20.27■□□□□ 0.84
CYTH3-206ENST00000478541 UTYO14607 1347 aa20.27■□□□□ 0.83
CYTH3-206ENST00000478541 PASKQ96RG2 1323 aa20.27■□□□□ 0.83
CYTH3-206ENST00000478541 ITGBL1O95965 494 aaPredicted RBP20.26■□□□□ 0.83
CYTH3-206ENST00000478541 GMPSP49915 693 aaPredicted RBP20.26■□□□□ 0.83
CYTH3-206ENST00000478541 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
CYTH3-206ENST00000478541 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
CYTH3-206ENST00000478541 A0A1B0GUL6 1792 aa20.26■□□□□ 0.83
CYTH3-206ENST00000478541 MED23Q9ULK4 1368 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
CYTH3-206ENST00000478541 HTRA3P83110 453 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 SMC4Q9NTJ3 1288 aa20.25■□□□□ 0.83
CYTH3-206ENST00000478541 PSMD14O00487 310 aa20.24■□□□□ 0.83
CYTH3-206ENST00000478541 CCT4P50991 539 aaKnown RBP20.24■□□□□ 0.83
CYTH3-206ENST00000478541 IFIT5Q13325 482 aaKnown RBP20.24■□□□□ 0.83
CYTH3-206ENST00000478541 EPHA10Q5JZY3 1008 aa20.24■□□□□ 0.83
CYTH3-206ENST00000478541 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
CYTH3-206ENST00000478541 DPF2Q92785 391 aa20.24■□□□□ 0.83
CYTH3-206ENST00000478541 ANKRD2Q9GZV1 360 aa20.24■□□□□ 0.83
CYTH3-206ENST00000478541 ZNF609O15014 1411 aa20.23■□□□□ 0.83
CYTH3-206ENST00000478541 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
CYTH3-206ENST00000478541 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
CYTH3-206ENST00000478541 NBPF7P0C2Y1 421 aaPredicted RBP20.22■□□□□ 0.83
CYTH3-206ENST00000478541 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
CYTH3-206ENST00000478541 PODNQ7Z5L7 613 aa20.22■□□□□ 0.83
CYTH3-206ENST00000478541 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
CYTH3-206ENST00000478541 KLRG1Q96E93 195 aa20.22■□□□□ 0.83
CYTH3-206ENST00000478541 KCNQ5Q9NR82 932 aa20.22■□□□□ 0.83
CYTH3-206ENST00000478541 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
CYTH3-206ENST00000478541 CNOT7Q9UIV1 285 aaKnown RBP20.22■□□□□ 0.83
CYTH3-206ENST00000478541 G3V3G9 751 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 VIL1P09327 827 aaKnown RBP20.21■□□□□ 0.83
CYTH3-206ENST00000478541 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 DCAF8Q5TAQ9 597 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 ZBTB12Q9Y330 459 aaPredicted RBP20.21■□□□□ 0.83
CYTH3-206ENST00000478541 CHMP3Q9Y3E7 222 aa20.21■□□□□ 0.83
CYTH3-206ENST00000478541 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
CYTH3-206ENST00000478541 WTIPA6NIX2 430 aaPredicted RBP20.2■□□□□ 0.82
CYTH3-206ENST00000478541 CHRNDQ07001 517 aa20.2■□□□□ 0.82
CYTH3-206ENST00000478541 ZNF804BA4D1E1 1349 aa20.2■□□□□ 0.82
CYTH3-206ENST00000478541 H7C1D1 291 aa20.19■□□□□ 0.82
CYTH3-206ENST00000478541 RARSP54136 660 aaKnown RBP20.19■□□□□ 0.82
CYTH3-206ENST00000478541 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
CYTH3-206ENST00000478541 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
CYTH3-206ENST00000478541 PGAP2Q9UHJ9 254 aa20.19■□□□□ 0.82
CYTH3-206ENST00000478541 TRPM7Q96QT4 1865 aa20.18■□□□□ 0.82
CYTH3-206ENST00000478541 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
CYTH3-206ENST00000478541 USP44Q9H0E7 712 aa20.18■□□□□ 0.82
CYTH3-206ENST00000478541 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
CYTH3-206ENST00000478541 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
CYTH3-206ENST00000478541 JMYQ8N9B5 988 aa20.17■□□□□ 0.82
CYTH3-206ENST00000478541 AGBL3Q8NEM8 1001 aa20.17■□□□□ 0.82
CYTH3-206ENST00000478541 COA1Q9GZY4 146 aa20.17■□□□□ 0.82
CYTH3-206ENST00000478541 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
CYTH3-206ENST00000478541 SHTN1A0MZ66 631 aa20.16■□□□□ 0.82
CYTH3-206ENST00000478541 TMEM88BA6NKF7 163 aa20.16■□□□□ 0.82
CYTH3-206ENST00000478541 RSBN1LQ6PCB5 846 aaPredicted RBP20.16■□□□□ 0.82
CYTH3-206ENST00000478541 LDHAL6AQ6ZMR3 332 aa20.16■□□□□ 0.82
CYTH3-206ENST00000478541 TXNRD3Q86VQ6 643 aa20.16■□□□□ 0.82
CYTH3-206ENST00000478541 TRPM4Q8TD43 1214 aa20.16■□□□□ 0.82
CYTH3-206ENST00000478541 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
CYTH3-206ENST00000478541 API5Q9BZZ5 524 aaKnown RBP20.16■□□□□ 0.82
CYTH3-206ENST00000478541 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
CYTH3-206ENST00000478541 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
CYTH3-206ENST00000478541 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
CYTH3-206ENST00000478541 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
CYTH3-206ENST00000478541 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
CYTH3-206ENST00000478541 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms