RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 NUTM1Q86Y26 1132 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 SYNE4Q8N205 404 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 NECTIN2Q92692 538 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 BCS1LQ9Y276 419 aa5.51□□□□□ -1.53
POLR2B-208ENST00000478188 ZNF330Q9Y3S2 320 aaPredicted RBP5.51□□□□□ -1.53
POLR2B-208ENST00000478188 TBC1D12O60347 775 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 IGKV5-2P06315 115 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 CASP7P55210 303 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 LSM11P83369 360 aaKnown RBP eCLIP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 PRPF40BQ6NWY9 871 aaKnown RBP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 TTLL6Q8N841 843 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 RBM46Q8TBY0 533 aaKnown RBP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 MASTLQ96GX5 879 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 HYPKQ9NX55 129 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 LHX6Q9UPM6 363 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 NPR1P16066 1061 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 GPTP24298 496 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 ST5P78524 1137 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
POLR2B-208ENST00000478188 NBPF5PQ86XG9 351 aaPredicted RBP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 ZC3H4Q9UPT8 1303 aaKnown RBP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 LAS1LQ9Y4W2 734 aaKnown RBP5.5□□□□□ -1.53
POLR2B-208ENST00000478188 ABCC4O15439 1325 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 H0YIN7 160 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 NYXQ9GZU5 481 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 RTL9Q8NET4 1388 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 POTECB2RU33 542 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 SLFN5Q08AF3 891 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 TWISTNBQ3B726 338 aaPredicted RBP5.49□□□□□ -1.53
POLR2B-208ENST00000478188 CRAMP1Q96RY5 1269 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 CDHR2Q9BYE9 1310 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 PITPNM2Q9BZ72 1349 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 EXOSC9Q06265 439 aaKnown RBP5.49□□□□□ -1.53
POLR2B-208ENST00000478188 C9orf131Q5VYM1 1079 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 TPTE2Q6XPS3 522 aa5.49□□□□□ -1.53
POLR2B-208ENST00000478188 METTL22Q9BUU2 404 aaPredicted RBP5.49□□□□□ -1.53
POLR2B-208ENST00000478188 ZNF609O15014 1411 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 FOXK1P85037 733 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 SF3B3Q15393 1217 aaKnown RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 HSP90AB3PQ58FF7 597 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 FAM9BQ8IZU0 186 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 UTP14AQ9BVJ6 771 aaKnown RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 RTFDC1Q9BY42 306 aaPredicted RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 GPHNQ9NQX3 736 aaPredicted RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 ELL2O00472 640 aaPredicted RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 C21orf2O43822 256 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 PLPP6Q8IY26 295 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 PTCD2Q8WV60 388 aaKnown RBP5.48□□□□□ -1.53
POLR2B-208ENST00000478188 CNKSR1Q969H4 720 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 LAMB1P07942 1786 aa5.48□□□□□ -1.53
POLR2B-208ENST00000478188 AIMP1Q12904 312 aaKnown RBP5.47□□□□□ -1.53
POLR2B-208ENST00000478188 ARHGAP27Q6ZUM4 889 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 PPP1R42Q7Z4L9 355 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 PSMD1Q99460 953 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 ECM29Q5VYK3 1845 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 SH3TC1Q8TE82 1336 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 IRS2Q9Y4H2 1338 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 PCCAP05165 728 aaPredicted RBP5.47□□□□□ -1.53
POLR2B-208ENST00000478188 LMNB1P20700 586 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
POLR2B-208ENST00000478188 KSR2Q6VAB6 950 aa5.47□□□□□ -1.53
POLR2B-208ENST00000478188 FAM177BA6PVY3 158 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 NEURL1BA8MQ27 555 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 ATP5J2-PTCD1G3V325 749 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 HCLS1P14317 486 aaPredicted RBP5.46□□□□□ -1.53
POLR2B-208ENST00000478188 FLIIQ13045 1269 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 MRPL50Q8N5N7 158 aaKnown RBP5.46□□□□□ -1.53
POLR2B-208ENST00000478188 ZBTB38Q8NAP3 1195 aaPredicted RBP5.46□□□□□ -1.53
POLR2B-208ENST00000478188 CCDC191Q8NCU4 936 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 CDCA7LQ96GN5 454 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 PLA2G12BQ9BX93 195 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 MAP3K2Q9Y2U5 619 aa5.46□□□□□ -1.53
POLR2B-208ENST00000478188 PAPPA2Q9BXP8 1791 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 UTYO14607 1347 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 ZNF541Q9H0D2 1346 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 TRPM7Q96QT4 1865 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 H7C1W4 665 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 CCDC93Q567U6 631 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 BEND3Q5T5X7 828 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 ZNF622Q969S3 477 aaKnown RBP eCLIP5.46□□□□□ -1.542e-6■■□□□ 14.3
POLR2B-208ENST00000478188 MYD88Q99836 296 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 RNF181Q9P0P0 153 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 PI4KAP2A4QPH2 592 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 FZD9O00144 591 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 ARHGAP33O14559 1287 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 TCERG1O14776 1098 aaKnown RBP5.46□□□□□ -1.54
POLR2B-208ENST00000478188 PPEF1O14829 653 aaPredicted RBP5.46□□□□□ -1.54
POLR2B-208ENST00000478188 BRPF1P55201 1214 aaPredicted RBP5.46□□□□□ -1.54
POLR2B-208ENST00000478188 GRAPQ13588 217 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 PI4KAP1Q8N8J0 262 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 GRAPLQ8TC17 118 aaPredicted RBP5.46□□□□□ -1.54
POLR2B-208ENST00000478188 FAM89AQ96GI7 184 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 CRISPLD2Q9H0B8 497 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 NMRK2Q9NPI5 230 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 ATP6V0A2Q9Y487 856 aa5.46□□□□□ -1.54
POLR2B-208ENST00000478188 E9PSI1 815 aa5.45□□□□□ -1.54
POLR2B-208ENST00000478188 TOMM70O94826 608 aa5.45□□□□□ -1.54
POLR2B-208ENST00000478188 PDE4AP27815 886 aa5.45□□□□□ -1.54
POLR2B-208ENST00000478188 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms