RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 MINPP1Q9UNW1 487 aa28.2■■■□□ 2.1
SF1-214ENST00000477596 ANKRD18BA2A2Z9 1011 aa28.19■■■□□ 2.1
SF1-214ENST00000477596 VEGFAP15692 232 aaPredicted RBP28.19■■■□□ 2.1
SF1-214ENST00000477596 EIF6P56537 245 aaKnown RBP28.19■■■□□ 2.1
SF1-214ENST00000477596 WASHC4Q2M389 1173 aa28.19■■■□□ 2.1
SF1-214ENST00000477596 BICC1Q9H694 974 aaKnown RBP28.19■■■□□ 2.1
SF1-214ENST00000477596 GGA1Q9UJY5 639 aa28.19■■■□□ 2.1
SF1-214ENST00000477596 GJA3Q9Y6H8 435 aa28.19■■■□□ 2.1
SF1-214ENST00000477596 A0A1B0GUL6 1792 aa28.19■■■□□ 2.1
SF1-214ENST00000477596 XDHP47989 1333 aa28.18■■■□□ 2.1
SF1-214ENST00000477596 CCT4P50991 539 aaKnown RBP28.18■■■□□ 2.1
SF1-214ENST00000477596 IFIT5Q13325 482 aaKnown RBP28.18■■■□□ 2.1
SF1-214ENST00000477596 ANKRD44Q8N8A2 993 aa28.18■■■□□ 2.1
SF1-214ENST00000477596 ZNF594Q96JF6 807 aaPredicted RBP28.18■■■□□ 2.1
SF1-214ENST00000477596 L3MBTL3Q96JM7 780 aaPredicted RBP28.18■■■□□ 2.1
SF1-214ENST00000477596 YDJCA8MPS7 323 aa28.17■■■□□ 2.1
SF1-214ENST00000477596 TRIM27P14373 513 aa28.17■■■□□ 2.1
SF1-214ENST00000477596 ARHGAP45Q92619 1136 aa28.17■■■□□ 2.1
SF1-214ENST00000477596 DBNDD1Q9H9R9 158 aa28.17■■■□□ 2.1
SF1-214ENST00000477596 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
SF1-214ENST00000477596 TOMM70O94826 608 aa28.16■■■□□ 2.1
SF1-214ENST00000477596 C16orf71Q8IYS4 520 aaPredicted RBP28.16■■■□□ 2.1
SF1-214ENST00000477596 GPC2Q8N158 579 aa28.16■■■□□ 2.1
SF1-214ENST00000477596 MPHOSPH8Q99549 860 aa28.16■■■□□ 2.1
SF1-214ENST00000477596 CXCL9Q07325 125 aa28.15■■■□□ 2.1
SF1-214ENST00000477596 DOK7Q18PE1 504 aa28.15■■■□□ 2.1
SF1-214ENST00000477596 EYA3Q99504 573 aa28.15■■■□□ 2.1
SF1-214ENST00000477596 SCN4AP35499 1836 aa28.15■■■□□ 2.1
SF1-214ENST00000477596 RAD17O75943 681 aa28.14■■■□□ 2.1
SF1-214ENST00000477596 CCDC57Q2TAC2 916 aa28.14■■■□□ 2.1
SF1-214ENST00000477596 RABL6Q3YEC7 729 aaPredicted RBP28.14■■■□□ 2.1
SF1-214ENST00000477596 ATF7IPQ6VMQ6 1270 aa28.14■■■□□ 2.1
SF1-214ENST00000477596 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
SF1-214ENST00000477596 ATP2B4P23634 1241 aa28.13■■■□□ 2.09
SF1-214ENST00000477596 SCN9AQ15858 1988 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 IPO8O15397 1037 aaKnown RBP28.12■■■□□ 2.09
SF1-214ENST00000477596 ECE2O60344 883 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 POTEIP0CG38 1075 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 POTEJP0CG39 1038 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 CHRNDQ07001 517 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 TAF7LQ5H9L4 462 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 MEIS3Q99687 375 aa28.12■■■□□ 2.09
SF1-214ENST00000477596 INTS3Q68E01 1043 aaKnown RBP28.11■■■□□ 2.09
SF1-214ENST00000477596 RBM46Q8TBY0 533 aaKnown RBP28.11■■■□□ 2.09
SF1-214ENST00000477596 ZC3H12CQ9C0D7 883 aaKnown RBP28.11■■■□□ 2.09
SF1-214ENST00000477596 SNAP23O00161 211 aa28.1■■■□□ 2.09
SF1-214ENST00000477596 KLRK1P26718 216 aa28.1■■■□□ 2.09
SF1-214ENST00000477596 SCNN1DP51172 638 aa28.1■■■□□ 2.09
SF1-214ENST00000477596 HELBQ8NG08 1087 aaPredicted RBP28.1■■■□□ 2.09
SF1-214ENST00000477596 TAF1DQ9H5J8 278 aaPredicted RBP28.1■■■□□ 2.09
SF1-214ENST00000477596 KCNQ5Q9NR82 932 aa28.1■■■□□ 2.09
SF1-214ENST00000477596 IQCA1LA6NCM1 817 aa28.09■■■□□ 2.09
SF1-214ENST00000477596 UBTFL1P0CB47 393 aaPredicted RBP28.09■■■□□ 2.09
SF1-214ENST00000477596 ZKSCAN2Q63HK3 967 aa28.09■■■□□ 2.09
SF1-214ENST00000477596 CIAPIN1Q6FI81 312 aa28.09■■■□□ 2.09
SF1-214ENST00000477596 PUS3Q9BZE2 481 aaKnown RBP28.09■■■□□ 2.09
SF1-214ENST00000477596 HACL1Q9UJ83 578 aa28.09■■■□□ 2.09
SF1-214ENST00000477596 TAF5LO75529 589 aa28.08■■■□□ 2.09
SF1-214ENST00000477596 ANKRD2Q9GZV1 360 aa28.08■■■□□ 2.09
SF1-214ENST00000477596 MED23Q9ULK4 1368 aa28.08■■■□□ 2.09
SF1-214ENST00000477596 LDHAL6AQ6ZMR3 332 aa28.07■■■□□ 2.08
SF1-214ENST00000477596 TXNRD3Q86VQ6 643 aa28.07■■■□□ 2.08
SF1-214ENST00000477596 KLHDC4Q8TBB5 520 aa28.07■■■□□ 2.08
SF1-214ENST00000477596 CNNM1Q9NRU3 951 aa28.07■■■□□ 2.08
SF1-214ENST00000477596 LRRFIP2Q9Y608 721 aaKnown RBP28.07■■■□□ 2.08
SF1-214ENST00000477596 EPHX2P34913 555 aa28.06■■■□□ 2.08
SF1-214ENST00000477596 EPS15P42566 896 aa28.06■■■□□ 2.08
SF1-214ENST00000477596 GMPSP49915 693 aaPredicted RBP28.06■■■□□ 2.08
SF1-214ENST00000477596 TMEM57Q8N5G2 664 aa28.06■■■□□ 2.08
SF1-214ENST00000477596 ZNF804BA4D1E1 1349 aa28.06■■■□□ 2.08
SF1-214ENST00000477596 PSMD14O00487 310 aa28.05■■■□□ 2.08
SF1-214ENST00000477596 ADAMTSL1Q8N6G6 1762 aa28.05■■■□□ 2.08
SF1-214ENST00000477596 LEMD3Q9Y2U8 911 aa28.05■■■□□ 2.08
SF1-214ENST00000477596 EAPPQ56P03 285 aaPredicted RBP28.04■■■□□ 2.08
SF1-214ENST00000477596 ZBTB12Q9Y330 459 aaPredicted RBP28.04■■■□□ 2.08
SF1-214ENST00000477596 SHTN1A0MZ66 631 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 G3V3G9 751 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 PLIN1O60240 522 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 RLBP1P12271 317 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 LMOD1P29536 600 aaPredicted RBP28.03■■■□□ 2.08
SF1-214ENST00000477596 KCNJ4P48050 445 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 TNIP1Q15025 636 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 DCAF8Q5TAQ9 597 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 SMC1BQ8NDV3 1235 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 PSME4Q14997 1843 aa28.03■■■□□ 2.08
SF1-214ENST00000477596 IRS2Q9Y4H2 1338 aa28.02■■■□□ 2.08
SF1-214ENST00000477596 RFX5P48382 616 aaPredicted RBP28.02■■■□□ 2.08
SF1-214ENST00000477596 LRRC24Q50LG9 513 aa28.02■■■□□ 2.08
SF1-214ENST00000477596 GPRC5DQ9NZD1 345 aa28.02■■■□□ 2.08
SF1-214ENST00000477596 FSTL1Q12841 308 aa28.01■■■□□ 2.07
SF1-214ENST00000477596 ZNF646O15015 1829 aaPredicted RBP28.01■■■□□ 2.07
SF1-214ENST00000477596 YTHDC1Q96MU7 727 aaKnown RBP28■■■□□ 2.07
SF1-214ENST00000477596 RIPOR2Q9Y4F9 1068 aa28■■■□□ 2.07
SF1-214ENST00000477596 HSPA6P17066 643 aa27.99■■■□□ 2.07
SF1-214ENST00000477596 FTSJ3Q8IY81 847 aaKnown RBP27.99■■■□□ 2.07
SF1-214ENST00000477596 GNAI3P08754 354 aa27.98■■■□□ 2.07
SF1-214ENST00000477596 CHADLQ6NUI6 762 aa27.98■■■□□ 2.07
SF1-214ENST00000477596 LDHDQ86WU2 507 aa27.98■■■□□ 2.07
SF1-214ENST00000477596 DZIP1LQ8IYY4 767 aaKnown RBP27.98■■■□□ 2.07
SF1-214ENST00000477596 PTPN12Q05209 780 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms