RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 IL22RA1Q8N6P7 574 aa8.43□□□□□ -1.06
UBR3-209ENST00000477461 TTC9Q92623 222 aa8.43□□□□□ -1.06
UBR3-209ENST00000477461 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
UBR3-209ENST00000477461 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
UBR3-209ENST00000477461 COL13A1Q5TAT6 717 aaPredicted RBP8.42□□□□□ -1.06
UBR3-209ENST00000477461 ATCAYQ86WG3 371 aa8.42□□□□□ -1.06
UBR3-209ENST00000477461 TRIM33Q9UPN9 1127 aa8.42□□□□□ -1.06
UBR3-209ENST00000477461 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
UBR3-209ENST00000477461 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
UBR3-209ENST00000477461 WFDC12Q8WWY7 111 aa8.41□□□□□ -1.06
UBR3-209ENST00000477461 RBSNQ9H1K0 784 aa8.41□□□□□ -1.06
UBR3-209ENST00000477461 CDC25BP30305 580 aa8.4□□□□□ -1.06
UBR3-209ENST00000477461 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.06
UBR3-209ENST00000477461 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
UBR3-209ENST00000477461 ALX3O95076 343 aa8.39□□□□□ -1.07
UBR3-209ENST00000477461 CYP2E1P05181 493 aaPredicted RBP8.39□□□□□ -1.07
UBR3-209ENST00000477461 NOS3P29474 1203 aa8.39□□□□□ -1.07
UBR3-209ENST00000477461 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
UBR3-209ENST00000477461 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
UBR3-209ENST00000477461 FNDC3AQ9Y2H6 1198 aaKnown RBP8.39□□□□□ -1.07
UBR3-209ENST00000477461 SOX18P35713 384 aa8.38□□□□□ -1.07
UBR3-209ENST00000477461 ATP11AP98196 1134 aa8.38□□□□□ -1.07
UBR3-209ENST00000477461 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
UBR3-209ENST00000477461 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
UBR3-209ENST00000477461 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
UBR3-209ENST00000477461 OR13H1Q8NG92 308 aa8.38□□□□□ -1.07
UBR3-209ENST00000477461 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
UBR3-209ENST00000477461 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
UBR3-209ENST00000477461 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 HYAL2Q12891 473 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 ABTB2Q8N961 1025 aa8.37□□□□□ -1.07
UBR3-209ENST00000477461 DLL1O00548 723 aa8.36□□□□□ -1.07
UBR3-209ENST00000477461 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
UBR3-209ENST00000477461 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
UBR3-209ENST00000477461 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
UBR3-209ENST00000477461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
UBR3-209ENST00000477461 A6NHS1 94 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 H2AFB2P0C5Z0 115 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
UBR3-209ENST00000477461 MTMR3Q13615 1198 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 SETDB1Q15047 1291 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 EDEM1Q92611 657 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 ELP3Q9H9T3 547 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 TMEM63CQ9P1W3 806 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 PPME1Q9Y570 386 aa8.35□□□□□ -1.07
UBR3-209ENST00000477461 C8orf34Q49A92 452 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 ADAMTSL4Q6UY14 1074 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 ZNF438Q7Z4V0 828 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 NCAPG2Q86XI2 1143 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
UBR3-209ENST00000477461 CNTN3Q9P232 1028 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
UBR3-209ENST00000477461 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.08
UBR3-209ENST00000477461 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
UBR3-209ENST00000477461 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
UBR3-209ENST00000477461 SH2B1Q9NRF2 756 aaPredicted RBP8.33□□□□□ -1.08
UBR3-209ENST00000477461 TRPA1O75762 1119 aa8.32□□□□□ -1.08
UBR3-209ENST00000477461 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR3-209ENST00000477461 AAMPQ13685 434 aa8.32□□□□□ -1.08
UBR3-209ENST00000477461 NOM1Q5C9Z4 860 aaKnown RBP8.32□□□□□ -1.08
UBR3-209ENST00000477461 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
UBR3-209ENST00000477461 HELQQ8TDG4 1101 aa8.32□□□□□ -1.08
UBR3-209ENST00000477461 TMEM88BA6NKF7 163 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 ACPPP15309 386 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 MPSTP25325 297 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 CDC27P30260 824 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 CARD10Q9BWT7 1032 aa8.31□□□□□ -1.08
UBR3-209ENST00000477461 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
UBR3-209ENST00000477461 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
UBR3-209ENST00000477461 CEP120Q8N960 986 aa8.3□□□□□ -1.08
UBR3-209ENST00000477461 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
UBR3-209ENST00000477461 PBX4Q9BYU1 374 aa8.3□□□□□ -1.08
UBR3-209ENST00000477461 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
UBR3-209ENST00000477461 KCNK4Q9NYG8 393 aa8.3□□□□□ -1.08
UBR3-209ENST00000477461 GLB1P16278 677 aa8.29□□□□□ -1.08
UBR3-209ENST00000477461 SSFA2P28290 1259 aa8.29□□□□□ -1.08
UBR3-209ENST00000477461 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
UBR3-209ENST00000477461 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
UBR3-209ENST00000477461 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
UBR3-209ENST00000477461 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
UBR3-209ENST00000477461 DDX3YO15523 660 aaKnown RBP8.28□□□□□ -1.08
UBR3-209ENST00000477461 KIF4AO95239 1232 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 PDGFAP04085 211 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 PCSK2P16519 638 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 CES1P23141 567 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 C14orf37Q86TY3 774 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 POLIQ9UNA4 740 aa8.28□□□□□ -1.08
UBR3-209ENST00000477461 WISP1O95388 367 aa8.27□□□□□ -1.09
UBR3-209ENST00000477461 EPHA1P21709 976 aa8.27□□□□□ -1.09
UBR3-209ENST00000477461 CD68P34810 354 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms