RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 PDRG1Q9NUG6 133 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 LAMC1P11047 1609 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 GPTP24298 496 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 HOXA7P31268 230 aaPredicted RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 HIBADHP31937 336 aaKnown RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 CLEC4GQ6UXB4 293 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 MCM10Q7L590 875 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 COPS6Q7L5N1 327 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 ZNF397Q8NF99 534 aaPredicted RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 DISP3Q9P2K9 1392 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 CDK12Q9NYV4 1490 aaPredicted RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 TNS3Q68CZ2 1445 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 MAGEB6P1A0A0J9YX57 407 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 ERVV-1B6SEH8 477 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 CTAGE5O15320 804 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 DALRD3Q5D0E6 543 aaKnown RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 CAVIN1Q6NZI2 390 aaKnown RBP5.35□□□□□ -1.55
CCNL1-215ENST00000474539 C2CD5Q86YS7 1000 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 VTI1AQ96AJ9 217 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 RMND1Q9NWS8 449 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 PRKAG2Q9UGJ0 569 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 GCC2Q8IWJ2 1684 aa5.35□□□□□ -1.55
CCNL1-215ENST00000474539 ATP10DQ9P241 1426 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 PHLPP2Q6ZVD8 1323 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 PLA2R1Q13018 1463 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 MBD5Q9P267 1494 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 KIAA0232Q92628 1395 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 JAKMIP3Q5VZ66 844 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 ZNF790Q6PG37 636 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 NSFL1CQ9UNZ2 370 aaKnown RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 PTCH1Q13635 1447 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 AOX1Q06278 1338 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 MAP3K19Q56UN5 1328 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 KIF1BO60333 1816 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 H0YCG3 227 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 IFIT3O14879 490 aaKnown RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 RANBP6O60518 1105 aaKnown RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 UFL1O94874 794 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 CAVIN2O95810 425 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 USHBP1Q8N6Y0 703 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 CHURC1Q8WUH1 139 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 PIBF1Q8WXW3 757 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 TTC12Q9H892 705 aaPredicted RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 VEZTQ9HBM0 779 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 NOD1Q9Y239 953 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 CYP7A1P22680 504 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 MCM5P33992 734 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 IRX3P78415 501 aaPredicted RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 TPRNQ4KMQ1 711 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 ZFYVE27Q5T4F4 411 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 UBE3BQ7Z3V4 1068 aa5.34□□□□□ -1.55
CCNL1-215ENST00000474539 METTL22Q9BUU2 404 aaPredicted RBP5.34□□□□□ -1.55
CCNL1-215ENST00000474539 SPATA31A3Q5VYP0 1347 aa5.34□□□□□ -1.56
CCNL1-215ENST00000474539 GOLGA8AA7E2F4 631 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 GOLGA8BA8MQT2 603 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 PPIP5K2O43314 1243 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 NR1I2O75469 434 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 NPR1P16066 1061 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 NOP2P46087 812 aaKnown RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 VPS72Q15906 364 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 SMARCC2Q8TAQ2 1214 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 RRP36Q96EU6 259 aaKnown RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 JPH2Q9BR39 696 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 A0A1W2PP64 1363 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 SPDYE3A6NKU9 549 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 RFX1P22670 979 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 IREB2P48200 963 aaKnown RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 NLRP5P59047 1200 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 FKBP15Q5T1M5 1219 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 LRSAM1Q6UWE0 723 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 ZNF713Q8N859 430 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 LPIN2Q92539 896 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 MTIF3Q9H2K0 278 aaKnown RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 BSDC1Q9NW68 430 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 POLKQ9UBT6 870 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.33□□□□□ -1.569e-9■■□□□ 14.3
CCNL1-215ENST00000474539 GJA3Q9Y6H8 435 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 FRMPD1Q5SYB0 1578 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 KIF4BQ2VIQ3 1234 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 ARHGAP27Q6ZUM4 889 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 SEPT12Q8IYM1 358 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 TEKT1Q969V4 418 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 SCAND2PQ9GZW5 306 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 AFF2P51816 1311 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 TBCAO75347 108 aaKnown RBP5.33□□□□□ -1.56
CCNL1-215ENST00000474539 MCF2L2Q86YR7 1114 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC17Q96LX7 622 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 EYA1Q99502 592 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 TBC1D2Q9BYX2 928 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 HELLSQ9NRZ9 838 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 PIM2Q9P1W9 311 aa5.33□□□□□ -1.56
CCNL1-215ENST00000474539 PI4KAP2A4QPH2 592 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 PABPN1LA6NDY0 278 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 RGL2O15211 777 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 WTAPQ15007 396 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 NLRX1Q86UT6 975 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms