RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	CDC5L	Q99459	802 aa	Known RBP	11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	POLL	Q9UGP5	575 aa		11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	ABT1	Q9ULW3	272 aa	Known RBP	11.42	□□□□□ -0.58
CHEK2-223	ENST00000472807	TRPM7	Q96QT4	1865 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	NEURL1B	A8MQ27	555 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	RIMBP2	O15034	1052 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	ECE2	O60344	883 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	UFL1	O94874	794 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	IGKV5-2	P06315	115 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	FLII	Q13045	1269 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	FKBP5	Q13451	457 aa	Predicted RBP	11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	CWF19L2	Q2TBE0	894 aa	Known RBP	11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	ANKRD18A	Q8IVF6	992 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	DBNDD1	Q9H9R9	158 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	PODXL2	Q9NZ53	605 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807	GGA1	Q9UJY5	639 aa		11.41	□□□□□ -0.58
CHEK2-223	ENST00000472807		G3V3G9	751 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807		H7C1D1	291 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	PSMD14	O00487	310 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	DCAF8	Q5TAQ9	597 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	G2E3	Q7L622	706 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	MICALL2	Q8IY33	904 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	FAM9B	Q8IZU0	186 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	GPR101	Q96P66	508 aa	Predicted RBP	11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	MYH16	Q9H6N6	1097 aa		11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	CNOT7	Q9UIV1	285 aa	Known RBP	11.4	□□□□□ -0.58
CHEK2-223	ENST00000472807	SPEF2	Q9C093	1822 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	XDH	P47989	1333 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	RASSF10	A6NK89	507 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	RPS12	P25398	132 aa	Known RBP	11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	VEGFB	P49765	207 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	EXOSC9	Q06265	439 aa	Known RBP	11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	DOK7	Q18PE1	504 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	DEFB115	Q30KQ5	88 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	UBE3B	Q7Z3V4	1068 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	ZC3H15	Q8WU90	426 aa	Known RBP	11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	DNAAF4	Q8WXU2	420 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	DPF2	Q92785	391 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	RTL9	Q8NET4	1388 aa		11.39	□□□□□ -0.59
CHEK2-223	ENST00000472807	TRAF5	O00463	557 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	VAMP4	O75379	141 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	GCKR	Q14397	625 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	LINS1	Q8NG48	757 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	TTLL11	Q8NHH1	800 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	TRPM4	Q8TD43	1214 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	AIDA	Q96BJ3	306 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	GREM2	Q9H772	168 aa		11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.38	□□□□□ -0.59
CHEK2-223	ENST00000472807	SCN9A	Q15858	1988 aa		11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	SHTN1	A0MZ66	631 aa		11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807		H7C1W4	665 aa		11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	ATP2B4	P23634	1241 aa		11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	IGHMBP2	P38935	993 aa	Known RBP	11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	BSDC1	Q9NW68	430 aa	Predicted RBP	11.37	□□□□□ -0.59
CHEK2-223	ENST00000472807	CELF2	O95319	508 aa	Known RBP	11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	ECE1	P42892	770 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	HIRA	P54198	1017 aa	Predicted RBP	11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	FMR1	Q06787	632 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	CDC37L1	Q7L3B6	337 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	TNS4	Q8IZW8	715 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	PLA2G12B	Q9BX93	195 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	KCNQ5	Q9NR82	932 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	PGAP2	Q9UHJ9	254 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	TLL2	Q9Y6L7	1015 aa		11.36	□□□□□ -0.59
CHEK2-223	ENST00000472807	WDR33	Q9C0J8	1336 aa	Known RBP	11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	PSME4	Q14997	1843 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	VIL1	P09327	827 aa	Known RBP	11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	ITGA6	P23229	1130 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	MAP2K1	Q02750	393 aa	Predicted RBP	11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	FAM161A	Q3B820	660 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	CST9	Q5W186	159 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	SAMD7	Q7Z3H4	446 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	ZNF408	Q9H9D4	720 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	MINPP1	Q9UNW1	487 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	MED23	Q9ULK4	1368 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	THSD7B	Q9C0I4	1608 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	ZNF609	O15014	1411 aa		11.35	□□□□□ -0.59
CHEK2-223	ENST00000472807	FOXN1	O15353	648 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	CASP7	P55210	303 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	GRM1	Q13255	1194 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	KIF4B	Q2VIQ3	1234 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	AGBL3	Q8NEM8	1001 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	DCPS	Q96C86	337 aa	Known RBP	11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	CAPNS2	Q96L46	248 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	MPHOSPH8	Q99549	860 aa		11.34	□□□□□ -0.59
CHEK2-223	ENST00000472807	USP17L3	A6NCW0	530 aa		11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	USP17L4	A6NCW7	530 aa		11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807		F6X3S4	739 aa		11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	EGFR	P00533	1210 aa		11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	CTCF	P49711	727 aa	Predicted RBP	11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	CCT4	P50991	539 aa	Known RBP	11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	RBM26	Q5T8P6	1007 aa	Known RBP	11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	CYP4F22	Q6NT55	531 aa		11.33	□□□□□ -0.6
CHEK2-223	ENST00000472807	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.33	□□□□□ -0.6

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