RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 HSF2BPO75031 334 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 C6orf50Q9HD87 102 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NBPF7P0C2Y1 421 aaPredicted RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 FEZ2Q9UHY8 353 aaPredicted RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NSFL1CQ9UNZ2 370 aaKnown RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 FAM13AO94988 1023 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 RRAGBQ5VZM2 374 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 SPOUT1Q5T280 376 aaKnown RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NCOA7Q8NI08 942 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 RNF34Q969K3 372 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PRKG1Q13976 671 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 RAB3GAP1Q15042 981 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 POGZQ7Z3K3 1410 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 MAK16Q9BXY0 300 aaKnown RBP15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 ANKFY1Q9P2R3 1169 aa15.03■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 AK9Q5TCS8 1911 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CCDC172P0C7W6 258 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 GABPAQ06546 454 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CHST3Q7LGC8 479 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CLSTN2Q9H4D0 955 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 SH2B1Q9NRF2 756 aaPredicted RBP15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CUX1P39880 1505 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 FGD6Q6ZV73 1430 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PI4KAP2A4QPH2 592 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 KIF4AO95239 1232 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 UAP1Q16222 522 aaPredicted RBP15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PPP4R4Q6NUP7 873 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PI4KAP1Q8N8J0 262 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NACA2Q9H009 215 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NECAB1Q8N987 351 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CEP83Q9Y592 693 aa15.02■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 IFI16Q16666 785 aaKnown RBP15.02□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 USP37Q86T82 979 aa15.02□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 UBE2Q2Q8WVN8 375 aa15.02□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SNW1Q13573 536 aaKnown RBP15.02□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CCDC102BQ68D86 513 aa15.02□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CSPG5O95196 566 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SYKP43405 635 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ASIC1P78348 528 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 BACH2Q9BYV9 841 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 NIP7Q9Y221 180 aaKnown RBP eCLIP15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 UBASH3AP57075 661 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 GSTO1P78417 241 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KRT9P35527 623 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CCDC114Q96M63 670 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 NEK1Q96PY6 1258 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MCM6Q14566 821 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 STX1AQ16623 288 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CTAGE5O15320 804 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 POLD1P28340 1107 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 EVI5LQ96CN4 794 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KIF2AO00139 706 aaPredicted RBP15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MRRFQ96E11 262 aaKnown RBP15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SELENOOQ9BVL4 669 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TTLL3Q9Y4R7 772 aa15.01□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KLF18A0A0U1RQI7 1052 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FAM170AA1A519 330 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CRCPO75575 148 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SSFA2P28290 1259 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FNBP4Q8N3X1 1017 aaPredicted RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CCT6BQ92526 530 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 UIMC1Q96RL1 719 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PPARDQ03181 441 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PPP1R21Q6ZMI0 780 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SELENOSQ9BQE4 189 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZHX1Q9UKY1 873 aaPredicted RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KRT5P13647 590 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZNF165P49910 485 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 DNAJC21Q5F1R6 531 aaKnown RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZBTB43O43298 467 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ADCY5O95622 1261 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MCM5P33992 734 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 DCAF17Q5H9S7 520 aaPredicted RBP15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CAPZA3Q96KX2 299 aa15□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PPME1Q9Y570 386 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 RTN1Q16799 776 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MIGA1Q8NAN2 632 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 GAS8O95995 478 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 GIMAP6Q6P9H5 292 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 HELBQ8NG08 1087 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KIFC2Q96AC6 838 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 GPHNQ9NQX3 736 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FBLN1P23142 703 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms