RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 OTUD7AQ8TE49 926 aaPredicted RBP21.43■■□□□ 1.02
HSPG2-208ENST00000471322 ARFGEF1Q9Y6D6 1849 aa21.43■■□□□ 1.02
HSPG2-208ENST00000471322 AOX1Q06278 1338 aa21.43■■□□□ 1.02
HSPG2-208ENST00000471322 GSPT1P15170 499 aaKnown RBP21.42■■□□□ 1.02
HSPG2-208ENST00000471322 MX1P20591 662 aa21.42■■□□□ 1.02
HSPG2-208ENST00000471322 DDX46Q7L014 1031 aaKnown RBP21.42■■□□□ 1.02
HSPG2-208ENST00000471322 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
HSPG2-208ENST00000471322 PDE8AO60658 829 aa21.41■■□□□ 1.02
HSPG2-208ENST00000471322 TBC1D32Q96NH3 1257 aa21.41■■□□□ 1.02
HSPG2-208ENST00000471322 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
HSPG2-208ENST00000471322 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
HSPG2-208ENST00000471322 TAF1P21675 1872 aa21.41■■□□□ 1.02
HSPG2-208ENST00000471322 CDHR2Q9BYE9 1310 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 YY1P25490 414 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 CASP7P55210 303 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 SF3B3Q15393 1217 aaKnown RBP21.4■■□□□ 1.02
HSPG2-208ENST00000471322 RABL6Q3YEC7 729 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-208ENST00000471322 C7orf43Q8WVR3 580 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 SEC31BQ9NQW1 1179 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 PPEF1O14829 653 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-208ENST00000471322 G3BP1Q13283 466 aaKnown RBP eCLIP21.4■■□□□ 1.02
HSPG2-208ENST00000471322 CASC1Q6TDU7 716 aa21.4■■□□□ 1.02
HSPG2-208ENST00000471322 NFKBIEO00221 500 aa21.39■■□□□ 1.01
HSPG2-208ENST00000471322 CTSWP56202 376 aa21.39■■□□□ 1.01
HSPG2-208ENST00000471322 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.01
HSPG2-208ENST00000471322 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.01
HSPG2-208ENST00000471322 COL4A1P02462 1669 aa21.39■■□□□ 1.01
HSPG2-208ENST00000471322 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
HSPG2-208ENST00000471322 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
HSPG2-208ENST00000471322 SDSP20132 328 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 PRELPP51888 382 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
HSPG2-208ENST00000471322 GRAPQ13588 217 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 CCDC152Q4G0S7 254 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 TTLL11Q8NHH1 800 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 GRAPLQ8TC17 118 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-208ENST00000471322 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 CCDC93Q567U6 631 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 C22orf23Q9BZE7 217 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 GREM2Q9H772 168 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
HSPG2-208ENST00000471322 CHD4Q14839 1912 aa21.36■■□□□ 1.01
HSPG2-208ENST00000471322 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
HSPG2-208ENST00000471322 C9orf131Q5VYM1 1079 aa21.36■■□□□ 1.01
HSPG2-208ENST00000471322 RNF181Q9P0P0 153 aa21.35■■□□□ 1.01
HSPG2-208ENST00000471322 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-208ENST00000471322 BBOX1O75936 387 aa21.34■■□□□ 1.01
HSPG2-208ENST00000471322 ERICH6Q7L0X2 663 aa21.34■■□□□ 1.01
HSPG2-208ENST00000471322 GPATCH3Q96I76 525 aa21.34■■□□□ 1.01
HSPG2-208ENST00000471322 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
HSPG2-208ENST00000471322 PA2G4Q9UQ80 394 aaKnown RBP21.34■■□□□ 1.01
HSPG2-208ENST00000471322 CHMP3Q9Y3E7 222 aa21.34■■□□□ 1.01
HSPG2-208ENST00000471322 FOXO4P98177 505 aa21.33■■□□□ 1.01
HSPG2-208ENST00000471322 SOGA3Q5TF21 947 aa21.33■■□□□ 1.01
HSPG2-208ENST00000471322 ZNF277Q9NRM2 450 aaPredicted RBP21.33■■□□□ 1.01
HSPG2-208ENST00000471322 ATP6V0A2Q9Y487 856 aa21.33■■□□□ 1.01
HSPG2-208ENST00000471322 TTC41PQ6P2S7 1318 aa21.33■■□□□ 1
HSPG2-208ENST00000471322 RPS8P62241 208 aaKnown RBP21.33■■□□□ 1
HSPG2-208ENST00000471322 PLA2G12BQ9BX93 195 aa21.33■■□□□ 1
HSPG2-208ENST00000471322 RFX5P48382 616 aaPredicted RBP21.32■■□□□ 1
HSPG2-208ENST00000471322 LMBR1LQ6UX01 489 aa21.32■■□□□ 1
HSPG2-208ENST00000471322 ERC2O15083 957 aa21.31■■□□□ 1
HSPG2-208ENST00000471322 IFIT2P09913 472 aaKnown RBP21.31■■□□□ 1
HSPG2-208ENST00000471322 LMNB1P20700 586 aa21.31■■□□□ 1
HSPG2-208ENST00000471322 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
HSPG2-208ENST00000471322 RTKN2Q8IZC4 609 aa21.31■■□□□ 1
HSPG2-208ENST00000471322 TMX4Q9H1E5 349 aaPredicted RBP21.31■■□□□ 1
HSPG2-208ENST00000471322 FER1L6Q2WGJ9 1857 aa21.31■■□□□ 1
HSPG2-208ENST00000471322 ITGA6P23229 1130 aa21.3■■□□□ 1
HSPG2-208ENST00000471322 BECN1Q14457 450 aa21.3■■□□□ 1
HSPG2-208ENST00000471322 ZNF526Q8TF50 670 aaPredicted RBP21.3■■□□□ 1
HSPG2-208ENST00000471322 MYH3P11055 1940 aa21.3■■□□□ 1
HSPG2-208ENST00000471322 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
HSPG2-208ENST00000471322 SASH1O94885 1247 aa21.29■■□□□ 1
HSPG2-208ENST00000471322 CSF1RP07333 972 aa21.29■■□□□ 1
HSPG2-208ENST00000471322 FKBP4Q02790 459 aaKnown RBP eCLIP21.29■■□□□ 1
HSPG2-208ENST00000471322 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
HSPG2-208ENST00000471322 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
HSPG2-208ENST00000471322 SP8Q8IXZ3 490 aa21.29■■□□□ 1
HSPG2-208ENST00000471322 SBF1O95248 1867 aa21.28■■□□□ 1
HSPG2-208ENST00000471322 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
HSPG2-208ENST00000471322 CDC5LQ99459 802 aaKnown RBP21.28■■□□□ 1
HSPG2-208ENST00000471322 ECHDC1Q9NTX5 307 aa21.28■■□□□ 1
HSPG2-208ENST00000471322 NSFL1CQ9UNZ2 370 aaKnown RBP21.28■■□□□ 1
HSPG2-208ENST00000471322 SNED1Q8TER0 1413 aa21.28■■□□□ 1
HSPG2-208ENST00000471322 CC2D2BQ6DHV5 1058 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 DPP8Q6V1X1 898 aaPredicted RBP21.27■■□□□ 1
HSPG2-208ENST00000471322 AACSQ86V21 672 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 MPNDQ8N594 471 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 PI4K2BQ8TCG2 481 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 SIL1Q9H173 461 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 CCDC88AQ3V6T2 1871 aa21.27■■□□□ 1
HSPG2-208ENST00000471322 REC8O95072 547 aa21.26■□□□□ 0.99
HSPG2-208ENST00000471322 GPSM2P81274 684 aa21.26■□□□□ 0.99
HSPG2-208ENST00000471322 TSHZ3Q63HK5 1081 aa21.26■□□□□ 0.99
HSPG2-208ENST00000471322 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
HSPG2-208ENST00000471322 LTBP3Q9NS15 1303 aa21.26■□□□□ 0.99
HSPG2-208ENST00000471322 IFIT5Q13325 482 aaKnown RBP21.26■□□□□ 0.99
HSPG2-208ENST00000471322 FBXO3Q9UK99 471 aa21.26■□□□□ 0.99
HSPG2-208ENST00000471322 ANKRD18BA2A2Z9 1011 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms