RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 FAM177BA6PVY3 158 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 YDJCA8MPS7 323 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 RNMTO43148 476 aaKnown RBP8.04□□□□□ -1.12
VARS-222ENST00000470953 A1BGP04217 495 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 PIP4K2AP48426 406 aaPredicted RBP8.04□□□□□ -1.12
VARS-222ENST00000470953 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
VARS-222ENST00000470953 NECAB3Q96P71 396 aaPredicted RBP8.04□□□□□ -1.12
VARS-222ENST00000470953 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 EPHX3Q9H6B9 360 aa8.04□□□□□ -1.12
VARS-222ENST00000470953 SCAF8Q9UPN6 1271 aaKnown RBP8.04□□□□□ -1.12
VARS-222ENST00000470953 CACNA1BQ00975 2339 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 GJB1P08034 283 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 FOXK2Q01167 660 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 TTLL12Q14166 644 aaPredicted RBP8.03□□□□□ -1.12
VARS-222ENST00000470953 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 PRAMEF18Q5VWM3 479 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 RIC1Q4ADV7 1423 aa8.03□□□□□ -1.12
VARS-222ENST00000470953 STARD3NLO95772 234 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 CCL5P13501 91 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 IL6STP40189 918 aaPredicted RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 TMEM31Q5JXX7 168 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 U2AF1L4Q8WU68 220 aaKnown RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 DPF2Q92785 391 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
VARS-222ENST00000470953 ASB2Q96Q27 587 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 LAMB1P07942 1786 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 UBR2Q8IWV8 1755 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 CLSPNQ9HAW4 1339 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 USP34Q70CQ2 3546 aa8.02□□□□□ -1.13
VARS-222ENST00000470953 CFAP54Q96N23 3096 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 TAF1P21675 1872 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 FAM86C2PA6NEL3 165 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 MANSC4A6NHS7 340 aaPredicted RBP8.01□□□□□ -1.13
VARS-222ENST00000470953 RGL2O15211 777 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 NHLH1Q02575 133 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 TCIRG1Q13488 830 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 CRY2Q49AN0 593 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 SULT6B1Q6IMI4 303 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 ARHGAP39Q9C0H5 1083 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 TTYH1Q9H313 450 aaPredicted RBP8.01□□□□□ -1.13
VARS-222ENST00000470953 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
VARS-222ENST00000470953 ZDBF2Q9HCK1 2354 aa8□□□□□ -1.13
VARS-222ENST00000470953 ABCC12Q96J65 1359 aa8□□□□□ -1.13
VARS-222ENST00000470953 PSMD14O00487 310 aa8□□□□□ -1.13
VARS-222ENST00000470953 INHBEP58166 350 aa8□□□□□ -1.13
VARS-222ENST00000470953 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
VARS-222ENST00000470953 TPTE2Q6XPS3 522 aa8□□□□□ -1.13
VARS-222ENST00000470953 ATXN2LQ8WWM7 1075 aaKnown RBP8□□□□□ -1.13
VARS-222ENST00000470953 VPS33BQ9H267 617 aa8□□□□□ -1.13
VARS-222ENST00000470953 ZBTB4Q9P1Z0 1013 aaPredicted RBP8□□□□□ -1.13
VARS-222ENST00000470953 KIAA2012Q0VF49 1180 aa7.99□□□□□ -1.13
VARS-222ENST00000470953 PRKG1Q13976 671 aa7.99□□□□□ -1.13
VARS-222ENST00000470953 ARHGEF6Q15052 776 aa7.99□□□□□ -1.13
VARS-222ENST00000470953 C3orf67Q6ZVT6 689 aa7.99□□□□□ -1.13
VARS-222ENST00000470953 PAWRQ96IZ0 340 aaKnown RBP7.99□□□□□ -1.13
VARS-222ENST00000470953 NIP7Q9Y221 180 aaKnown RBP eCLIP7.99□□□□□ -1.13
VARS-222ENST00000470953 HEG1Q9ULI3 1381 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 SGPL1O95470 568 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 SCARF1Q14162 830 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 HLFQ16534 295 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 CLEC4GQ6UXB4 293 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 DIS3LQ8TF46 1054 aaKnown RBP7.98□□□□□ -1.13
VARS-222ENST00000470953 PTPN18Q99952 460 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 WDFY4Q6ZS81 3184 aa7.98□□□□□ -1.13
VARS-222ENST00000470953 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
VARS-222ENST00000470953 KCNQ3O43525 872 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 HOXA10P31260 410 aaPredicted RBP7.97□□□□□ -1.13
VARS-222ENST00000470953 MDM2Q00987 491 aaPredicted RBP7.97□□□□□ -1.13
VARS-222ENST00000470953 TTC5Q8N0Z6 440 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 RTFDC1Q9BY42 306 aaPredicted RBP7.97□□□□□ -1.13
VARS-222ENST00000470953 THEGQ9P2T0 379 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 FZD1Q9UP38 647 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 KIF7Q2M1P5 1343 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 XIRP2A4UGR9 3374 aa7.97□□□□□ -1.13
VARS-222ENST00000470953 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.13
VARS-222ENST00000470953 CHD8Q9HCK8 2581 aa7.96□□□□□ -1.13
VARS-222ENST00000470953 GPR37L1O60883 481 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 IL13P35225 146 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 MRPS5P82675 430 aaKnown RBP7.96□□□□□ -1.14
VARS-222ENST00000470953 KCTD2Q14681 263 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 MTHFSDQ2M296 383 aaKnown RBP7.96□□□□□ -1.14
VARS-222ENST00000470953 ZNF790Q6PG37 636 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 SUPT20HQ8NEM7 779 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 PPM1EQ8WY54 764 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 WNK4Q96J92 1243 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 UNC93B1Q9H1C4 597 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 TIMELESSQ9UNS1 1208 aa7.96□□□□□ -1.14
VARS-222ENST00000470953 C5orf42Q9H799 3197 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 NBPF26B4DH59 902 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
VARS-222ENST00000470953 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
VARS-222ENST00000470953 GRK4P32298 578 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms