RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 EYA2O00167 538 aa15.73■□□□□ 0.11
SND1-209ENST00000470723 GPR162Q16538 588 aa15.73■□□□□ 0.11
SND1-209ENST00000470723 ATG9AQ7Z3C6 839 aa15.72■□□□□ 0.11
SND1-209ENST00000470723 PSMD1Q99460 953 aa15.72■□□□□ 0.11
SND1-209ENST00000470723 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
SND1-209ENST00000470723 ANKRD2Q9GZV1 360 aa15.72■□□□□ 0.11
SND1-209ENST00000470723 VPS33BQ9H267 617 aa15.72■□□□□ 0.11
SND1-209ENST00000470723 LTBP3Q9NS15 1303 aa15.71■□□□□ 0.11
SND1-209ENST00000470723 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
SND1-209ENST00000470723 TAF7LQ5H9L4 462 aa15.71■□□□□ 0.11
SND1-209ENST00000470723 OLFM4Q6UX06 510 aa15.71■□□□□ 0.11
SND1-209ENST00000470723 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
SND1-209ENST00000470723 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
SND1-209ENST00000470723 MROH5Q6ZUA9 1318 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 HMMRO75330 724 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 IL15P40933 162 aaPredicted RBP15.7■□□□□ 0.1
SND1-209ENST00000470723 CHRNDQ07001 517 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 MPNDQ8N594 471 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
SND1-209ENST00000470723 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
SND1-209ENST00000470723 FER1L6Q2WGJ9 1857 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 GPSM2P81274 684 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
SND1-209ENST00000470723 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 DCTPP1Q9H773 170 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
SND1-209ENST00000470723 NSFL1CQ9UNZ2 370 aaKnown RBP15.69■□□□□ 0.1
SND1-209ENST00000470723 XDHP47989 1333 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 NFKBIEO00221 500 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 PDE8BO95263 885 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 ATP2B4P23634 1241 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.11e-6■■■■□ 23.5
SND1-209ENST00000470723 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.13e-8■■■□□ 18.5
SND1-209ENST00000470723 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
SND1-209ENST00000470723 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 TBC1D16Q8TBP0 767 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
SND1-209ENST00000470723 POLLQ9UGP5 575 aa15.68■□□□□ 0.1
SND1-209ENST00000470723 SURF6O75683 361 aaKnown RBP15.67■□□□□ 0.1
SND1-209ENST00000470723 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
SND1-209ENST00000470723 UBE4AQ14139 1066 aa15.67■□□□□ 0.1
SND1-209ENST00000470723 HSP90AB4PQ58FF6 505 aa15.67■□□□□ 0.1
SND1-209ENST00000470723 ERICH6BQ5W0A0 696 aa15.67■□□□□ 0.1
SND1-209ENST00000470723 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
SND1-209ENST00000470723 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
SND1-209ENST00000470723 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
SND1-209ENST00000470723 SASH1O94885 1247 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 FGFR2P21802 821 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 GGA1Q9UJY5 639 aa15.66■□□□□ 0.1
SND1-209ENST00000470723 LTBP1Q14766 1721 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
SND1-209ENST00000470723 RAB11FIP3O75154 756 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 PRELPP51888 382 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
SND1-209ENST00000470723 SIL1Q9H173 461 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 GPR108Q9NPR9 543 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 ZNF804BA4D1E1 1349 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
SND1-209ENST00000470723 ZBTB22O15209 634 aa15.64■□□□□ 0.09
SND1-209ENST00000470723 TAF5LO75529 589 aa15.64■□□□□ 0.09
SND1-209ENST00000470723 SBF1O95248 1867 aa15.64■□□□□ 0.09
SND1-209ENST00000470723 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
SND1-209ENST00000470723 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
SND1-209ENST00000470723 LMNB1P20700 586 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 WASHC4Q2M389 1173 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 ERC1Q8IUD2 1116 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 EYA3Q99504 573 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 SPEF2Q9C093 1822 aa15.63■□□□□ 0.09
SND1-209ENST00000470723 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 UFL1O94874 794 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 TFCP2Q12800 502 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 LPIN2Q92539 896 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 ZC3H12CQ9C0D7 883 aaKnown RBP15.62■□□□□ 0.09
SND1-209ENST00000470723 AKAP2Q9Y2D5 859 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.62■□□□□ 0.09
SND1-209ENST00000470723 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
SND1-209ENST00000470723 SNAP23O00161 211 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 IGHDP01880 384 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 IARSP41252 1262 aaKnown RBP15.61■□□□□ 0.09
SND1-209ENST00000470723 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
SND1-209ENST00000470723 FBXO33Q7Z6M2 555 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 RHPN1Q8TCX5 695 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 GCC1Q96CN9 775 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 KIF1BPQ96EK5 621 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
SND1-209ENST00000470723 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
SND1-209ENST00000470723 NEFLP07196 543 aa15.6■□□□□ 0.09
SND1-209ENST00000470723 TXNRD3Q86VQ6 643 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms