RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 HSPA6P17066 643 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 POLD1P28340 1107 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 KCNQ4P56696 695 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 MSS51Q4VC12 460 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 THUMPD2Q9BTF0 503 aaKnown RBP8.5□□□□□ -1.05
VAMP3-202ENST00000470357 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 ATP10DQ9P241 1426 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 TSPYL4Q9UJ04 414 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 MRC1P22897 1456 aa8.5□□□□□ -1.05
VAMP3-202ENST00000470357 ADCY9O60503 1353 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 GJA5P36382 358 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 EXOSC9Q06265 439 aaKnown RBP8.49□□□□□ -1.05
VAMP3-202ENST00000470357 ALDH1L2Q3SY69 923 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
VAMP3-202ENST00000470357 PRKD2Q9BZL6 878 aa8.49□□□□□ -1.05
VAMP3-202ENST00000470357 ERVV-2B6SEH9 535 aa8.48□□□□□ -1.05
VAMP3-202ENST00000470357 CYP27B1O15528 508 aa8.48□□□□□ -1.05
VAMP3-202ENST00000470357 HOXB7P09629 217 aa8.48□□□□□ -1.05
VAMP3-202ENST00000470357 RRP1P56182 461 aaKnown RBP8.48□□□□□ -1.05
VAMP3-202ENST00000470357 TWISTNBQ3B726 338 aaPredicted RBP8.48□□□□□ -1.05
VAMP3-202ENST00000470357 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
VAMP3-202ENST00000470357 TFCP2L1Q9NZI6 479 aa8.48□□□□□ -1.05
VAMP3-202ENST00000470357 ITGB4P16144 1822 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 BTBD11A6QL63 1104 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 IPO8O15397 1037 aaKnown RBP8.47□□□□□ -1.05
VAMP3-202ENST00000470357 RARSP54136 660 aaKnown RBP8.47□□□□□ -1.05
VAMP3-202ENST00000470357 MTMR2Q13614 643 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 COL23A1Q86Y22 540 aaPredicted RBP8.47□□□□□ -1.05
VAMP3-202ENST00000470357 SLC52A2Q9HAB3 445 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
VAMP3-202ENST00000470357 KIF16BQ96L93 1317 aa8.47□□□□□ -1.05
VAMP3-202ENST00000470357 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.05
VAMP3-202ENST00000470357 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 CLK2P49760 499 aaKnown RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 MMP16P51512 607 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 CABP4P57796 275 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 DDX54Q8TDD1 881 aaKnown RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.06
VAMP3-202ENST00000470357 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 SMC4Q9NTJ3 1288 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
VAMP3-202ENST00000470357 SPDYE5A6NIY4 337 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 VAMP4O75379 141 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
VAMP3-202ENST00000470357 SLC19A1P41440 591 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 PDE3AQ14432 1141 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 QPCTQ16769 361 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 LIAT1Q6ZQX7 453 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 TTC5Q8N0Z6 440 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 CD2APQ9Y5K6 639 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 UBR2Q8IWV8 1755 aa8.45□□□□□ -1.06
VAMP3-202ENST00000470357 LY75O60449 1722 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 DOT1LQ8TEK3 1739 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 TOGARAM1Q9Y4F4 1720 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 LAMB4A4D0S4 1761 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 JUNDP17535 347 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 AAMPQ13685 434 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
VAMP3-202ENST00000470357 CCDC30Q5VVM6 783 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 C8orf58Q8NAV2 365 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 ARHGAP45Q92619 1136 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 STK31Q9BXU1 1019 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-202ENST00000470357 PCNTO95613 3336 aa8.44□□□□□ -1.06
VAMP3-202ENST00000470357 LILRB3O75022 631 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 EIF4A1P60842 406 aaKnown RBP8.43□□□□□ -1.06
VAMP3-202ENST00000470357 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-202ENST00000470357 ZKSCAN2Q63HK3 967 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 ZNF790Q6PG37 636 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-202ENST00000470357 SSH1Q8WYL5 1049 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 MIS18AQ9NYP9 233 aa8.43□□□□□ -1.06
VAMP3-202ENST00000470357 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-202ENST00000470357 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
VAMP3-202ENST00000470357 ELL2O00472 640 aaPredicted RBP8.42□□□□□ -1.06
VAMP3-202ENST00000470357 BCAR3O75815 825 aa8.42□□□□□ -1.06
VAMP3-202ENST00000470357 AMIGO3Q86WK7 504 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms