RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 BRF1Q92994 677 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 METP08581 1390 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
LIMS2-213ENST00000469300 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-213ENST00000469300 CERS3Q8IU89 383 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 ATP7BP35670 1465 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 IFIT1BQ5T764 474 aaKnown RBP17.41■□□□□ 0.38
LIMS2-213ENST00000469300 KANK3Q6NY19 840 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 RLBP1P12271 317 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 DESP17661 470 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 RBM25P49756 843 aaKnown RBP17.41■□□□□ 0.38
LIMS2-213ENST00000469300 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
LIMS2-213ENST00000469300 CALML4Q96GE6 196 aa17.41■□□□□ 0.38
LIMS2-213ENST00000469300 LDHBP07195 334 aaKnown RBP17.4■□□□□ 0.38
LIMS2-213ENST00000469300 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
LIMS2-213ENST00000469300 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
LIMS2-213ENST00000469300 TFCP2Q12800 502 aa17.4■□□□□ 0.38
LIMS2-213ENST00000469300 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
LIMS2-213ENST00000469300 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-213ENST00000469300 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
LIMS2-213ENST00000469300 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
LIMS2-213ENST00000469300 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
LIMS2-213ENST00000469300 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
LIMS2-213ENST00000469300 RTN1Q16799 776 aa17.39■□□□□ 0.37
LIMS2-213ENST00000469300 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-213ENST00000469300 ZNF496Q96IT1 587 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-213ENST00000469300 CAVIN2O95810 425 aa17.39■□□□□ 0.37
LIMS2-213ENST00000469300 UBA7P41226 1012 aa17.39■□□□□ 0.37
LIMS2-213ENST00000469300 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
LIMS2-213ENST00000469300 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
LIMS2-213ENST00000469300 NF2P35240 595 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
LIMS2-213ENST00000469300 G2E3Q7L622 706 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 CNNM3Q8NE01 707 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 AOX1Q06278 1338 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIMS2-213ENST00000469300 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 SPC24Q8NBT2 197 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 FLAD1Q8NFF5 587 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIMS2-213ENST00000469300 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-213ENST00000469300 FKBP15Q5T1M5 1219 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
LIMS2-213ENST00000469300 PHKG2P15735 406 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 CFAP100Q494V2 611 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 ITGA6P23229 1130 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 VAT1LQ9HCJ6 419 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 A1BGP04217 495 aa17.37■□□□□ 0.37
LIMS2-213ENST00000469300 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-213ENST00000469300 MAST3O60307 1309 aa17.36■□□□□ 0.37
LIMS2-213ENST00000469300 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
LIMS2-213ENST00000469300 CALML3P27482 149 aa17.36■□□□□ 0.37
LIMS2-213ENST00000469300 GCKRQ14397 625 aa17.36■□□□□ 0.37
LIMS2-213ENST00000469300 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
LIMS2-213ENST00000469300 TNNI2P48788 182 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 ARHGEF25Q86VW2 580 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
LIMS2-213ENST00000469300 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 UQCRHLA0A096LP55 91 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 B4DLN1 442 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 UQCRHP07919 91 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
LIMS2-213ENST00000469300 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-213ENST00000469300 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 H0YHG0 523 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 PRC1O43663 620 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 ERLIN2O94905 339 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 SSFA2P28290 1259 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 HIBADHP31937 336 aaKnown RBP17.35■□□□□ 0.37
LIMS2-213ENST00000469300 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 SNX21Q969T3 373 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
LIMS2-213ENST00000469300 USP19O94966 1318 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 SYCE3A1L190 88 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
LIMS2-213ENST00000469300 SEC24BO95487 1268 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 BAG6P46379 1132 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 TNPO1Q92973 898 aaKnown RBP17.34■□□□□ 0.37
LIMS2-213ENST00000469300 SCLT1Q96NL6 688 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 ALG1Q9BT22 464 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 KDM5CP41229 1560 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 ABCC3O15438 1527 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-213ENST00000469300 CCDC102BQ68D86 513 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms