RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 GGA1Q9UJY5 639 aa18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 MINPP1Q9UNW1 487 aa18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 GNAI3P08754 354 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 ATP2B4P23634 1241 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 EIF6P56537 245 aaKnown RBP18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 TAF7LQ5H9L4 462 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 TBC1D16Q8TBP0 767 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 ANKRD2Q9GZV1 360 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 BICC1Q9H694 974 aaKnown RBP18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 POLLQ9UGP5 575 aa18.57■□□□□ 0.56
TMEM39A-205ENST00000468676 SPEF2Q9C093 1822 aa18.56■□□□□ 0.56
TMEM39A-205ENST00000468676 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
TMEM39A-205ENST00000468676 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
TMEM39A-205ENST00000468676 LTBP1Q14766 1721 aa18.56■□□□□ 0.56
TMEM39A-205ENST00000468676 DUOX1Q9NRD9 1551 aa18.55■□□□□ 0.56
TMEM39A-205ENST00000468676 UFL1O94874 794 aa18.55■□□□□ 0.56
TMEM39A-205ENST00000468676 MS4A1P11836 297 aa18.55■□□□□ 0.56
TMEM39A-205ENST00000468676 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
TMEM39A-205ENST00000468676 RCAN3Q9UKA8 241 aa18.55■□□□□ 0.56
TMEM39A-205ENST00000468676 VEGFAP15692 232 aaPredicted RBP18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 GPC2Q8N158 579 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 ANKRD44Q8N8A2 993 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 CLUAP1Q96AJ1 413 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 LEMD3Q9Y2U8 911 aa18.54■□□□□ 0.56
TMEM39A-205ENST00000468676 DDNO94850 711 aaPredicted RBP18.53■□□□□ 0.56
TMEM39A-205ENST00000468676 L3MBTL3Q96JM7 780 aaPredicted RBP18.53■□□□□ 0.56
TMEM39A-205ENST00000468676 WDR90Q96KV7 1748 aa18.53■□□□□ 0.56
TMEM39A-205ENST00000468676 RRAGCQ9HB90 399 aa18.53■□□□□ 0.56
TMEM39A-205ENST00000468676 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 KIF3CO14782 793 aa18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 C16orf71Q8IYS4 520 aaPredicted RBP18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 MEIS3Q99687 375 aa18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 COL4A5P29400 1685 aa18.52■□□□□ 0.56
TMEM39A-205ENST00000468676 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 G3V3G9 751 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 RIMBP2O15034 1052 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 CHRNDQ07001 517 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 TNIP1Q15025 636 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 TNNQ9UQP3 1299 aa18.51■□□□□ 0.55
TMEM39A-205ENST00000468676 KCNJ4P48050 445 aa18.5■□□□□ 0.55
TMEM39A-205ENST00000468676 ZNF594Q96JF6 807 aaPredicted RBP18.5■□□□□ 0.55
TMEM39A-205ENST00000468676 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
TMEM39A-205ENST00000468676 LRRFIP2Q9Y608 721 aaKnown RBP18.5■□□□□ 0.55
TMEM39A-205ENST00000468676 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 SCN4AP35499 1836 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 TOMM70O94826 608 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 CXCL9Q07325 125 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 CIAPIN1Q6FI81 312 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 MED23Q9ULK4 1368 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 MROH5Q6ZUA9 1318 aa18.49■□□□□ 0.55
TMEM39A-205ENST00000468676 ECE2O60344 883 aa18.48■□□□□ 0.55
TMEM39A-205ENST00000468676 GNAI2P04899 355 aa18.48■□□□□ 0.55
TMEM39A-205ENST00000468676 GJA3Q9Y6H8 435 aa18.48■□□□□ 0.55
TMEM39A-205ENST00000468676 POTECB2RU33 542 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 DOK7Q18PE1 504 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 PODNQ7Z5L7 613 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 DBNDD1Q9H9R9 158 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 HACL1Q9UJ83 578 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 FBXO3Q9UK99 471 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
TMEM39A-205ENST00000468676 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 RLBP1P12271 317 aa18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 LMOD1P29536 600 aaPredicted RBP18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 C15orf52Q6ZUT6 534 aaKnown RBP18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 HELBQ8NG08 1087 aaPredicted RBP18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 RBM46Q8TBY0 533 aaKnown RBP18.46■□□□□ 0.55
TMEM39A-205ENST00000468676 TAF5LO75529 589 aa18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 RAD17O75943 681 aa18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 RFX5P48382 616 aaPredicted RBP18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 MTX1Q13505 466 aa18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 UBE4AQ14139 1066 aa18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 PUS3Q9BZE2 481 aaKnown RBP18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 COA1Q9GZY4 146 aa18.45■□□□□ 0.54
TMEM39A-205ENST00000468676 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 PLIN1O60240 522 aa18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 METTL24Q5JXM2 366 aa18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 A0A1B0GUL6 1792 aa18.44■□□□□ 0.54
TMEM39A-205ENST00000468676 WTIPA6NIX2 430 aaPredicted RBP18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 EYA2O00167 538 aa18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 CIAO1O76071 339 aa18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 RPS12P25398 132 aaKnown RBP18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 LRRC24Q50LG9 513 aa18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
TMEM39A-205ENST00000468676 PSMD14O00487 310 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 VIL1P09327 827 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms