RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 TAF1DQ9H5J8 278 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-215ENST00000468018 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 HNRNPUQ00839 825 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATG4B-215ENST00000468018 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
ATG4B-215ENST00000468018 XDHP47989 1333 aa19.21■□□□□ 0.67
ATG4B-215ENST00000468018 NBPF7P0C2Y1 421 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-215ENST00000468018 EYA3Q99504 573 aa19.2■□□□□ 0.66
ATG4B-215ENST00000468018 C9orf78Q9NZ63 289 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-215ENST00000468018 HACL1Q9UJ83 578 aa19.2■□□□□ 0.66
ATG4B-215ENST00000468018 C6orf229H3BNL8 230 aa19.19■□□□□ 0.66
ATG4B-215ENST00000468018 POTEIP0CG38 1075 aa19.19■□□□□ 0.66
ATG4B-215ENST00000468018 POTEJP0CG39 1038 aa19.19■□□□□ 0.66
ATG4B-215ENST00000468018 GGA1Q9UJY5 639 aa19.19■□□□□ 0.66
ATG4B-215ENST00000468018 ZBED9Q6R2W3 1325 aa19.19■□□□□ 0.66
ATG4B-215ENST00000468018 UFL1O94874 794 aa19.18■□□□□ 0.66
ATG4B-215ENST00000468018 IGHMBP2P38935 993 aaKnown RBP19.18■□□□□ 0.66
ATG4B-215ENST00000468018 SUCLG2Q96I99 432 aa19.18■□□□□ 0.66
ATG4B-215ENST00000468018 GPR101Q96P66 508 aaPredicted RBP19.18■□□□□ 0.66
ATG4B-215ENST00000468018 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
ATG4B-215ENST00000468018 CEP350Q5VT06 3117 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 ANKRD18BA2A2Z9 1011 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 EPHX2P34913 555 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-215ENST00000468018 CIAPIN1Q6FI81 312 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 DBNDD1Q9H9R9 158 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 NOB1Q9ULX3 412 aaKnown RBP19.17■□□□□ 0.66
ATG4B-215ENST00000468018 GJA3Q9Y6H8 435 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 MED23Q9ULK4 1368 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 ZNF609O15014 1411 aa19.17■□□□□ 0.66
ATG4B-215ENST00000468018 RIMBP2O15034 1052 aa19.16■□□□□ 0.66
ATG4B-215ENST00000468018 ECE2O60344 883 aa19.16■□□□□ 0.66
ATG4B-215ENST00000468018 LDHDQ86WU2 507 aa19.16■□□□□ 0.66
ATG4B-215ENST00000468018 ARHGAP45Q92619 1136 aa19.16■□□□□ 0.66
ATG4B-215ENST00000468018 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-215ENST00000468018 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
ATG4B-215ENST00000468018 APLP1P51693 650 aa19.15■□□□□ 0.66
ATG4B-215ENST00000468018 IFIT5Q13325 482 aaKnown RBP19.15■□□□□ 0.66
ATG4B-215ENST00000468018 CHADLQ6NUI6 762 aa19.15■□□□□ 0.66
ATG4B-215ENST00000468018 PNMA8AQ86V59 439 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-215ENST00000468018 ZC3H12CQ9C0D7 883 aaKnown RBP19.15■□□□□ 0.66
ATG4B-215ENST00000468018 GPRC5DQ9NZD1 345 aa19.15■□□□□ 0.66
ATG4B-215ENST00000468018 RAD17O75943 681 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 EPS15P42566 896 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 TNIP1Q15025 636 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 MPHOSPH8Q99549 860 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 API5Q9BZZ5 524 aaKnown RBP19.14■□□□□ 0.65
ATG4B-215ENST00000468018 LEMD3Q9Y2U8 911 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 KIF16BQ96L93 1317 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 IRS2Q9Y4H2 1338 aa19.14■□□□□ 0.65
ATG4B-215ENST00000468018 PSMD14O00487 310 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 GMPSP49915 693 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-215ENST00000468018 CHRNDQ07001 517 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 DOK7Q18PE1 504 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 KCNQ5Q9NR82 932 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 PASKQ96RG2 1323 aa19.13■□□□□ 0.65
ATG4B-215ENST00000468018 POLR2AP24928 1970 aaKnown RBP19.12■□□□□ 0.65
ATG4B-215ENST00000468018 TRPM7Q96QT4 1865 aa19.12■□□□□ 0.65
ATG4B-215ENST00000468018 LMOD1P29536 600 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-215ENST00000468018 BICC1Q9H694 974 aaKnown RBP19.12■□□□□ 0.65
ATG4B-215ENST00000468018 ITGBL1O95965 494 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-215ENST00000468018 VIL1P09327 827 aaKnown RBP19.11■□□□□ 0.65
ATG4B-215ENST00000468018 CCDC57Q2TAC2 916 aa19.11■□□□□ 0.65
ATG4B-215ENST00000468018 USP50Q70EL3 339 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-215ENST00000468018 TXNRD3Q86VQ6 643 aa19.11■□□□□ 0.65
ATG4B-215ENST00000468018 DPF2Q92785 391 aa19.11■□□□□ 0.65
ATG4B-215ENST00000468018 ZNF594Q96JF6 807 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-215ENST00000468018 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
ATG4B-215ENST00000468018 ZNF804BA4D1E1 1349 aa19.1■□□□□ 0.65
ATG4B-215ENST00000468018 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
ATG4B-215ENST00000468018 C15orf52Q6ZUT6 534 aaKnown RBP19.1■□□□□ 0.65
ATG4B-215ENST00000468018 PODNQ7Z5L7 613 aa19.1■□□□□ 0.65
ATG4B-215ENST00000468018 DNAJC5GQ8N7S2 189 aa19.1■□□□□ 0.65
ATG4B-215ENST00000468018 ADARB2Q9NS39 739 aaKnown RBP19.1■□□□□ 0.65
ATG4B-215ENST00000468018 BCAR3O75815 825 aa19.09■□□□□ 0.65
ATG4B-215ENST00000468018 RPS12P25398 132 aaKnown RBP19.09■□□□□ 0.65
ATG4B-215ENST00000468018 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-215ENST00000468018 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-215ENST00000468018 SHTN1A0MZ66 631 aa19.08■□□□□ 0.64
ATG4B-215ENST00000468018 TRIM27P14373 513 aa19.08■□□□□ 0.64
ATG4B-215ENST00000468018 KLRK1P26718 216 aa19.08■□□□□ 0.64
ATG4B-215ENST00000468018 PGAP2Q9UHJ9 254 aa19.08■□□□□ 0.64
ATG4B-215ENST00000468018 CNOT7Q9UIV1 285 aaKnown RBP19.08■□□□□ 0.64
ATG4B-215ENST00000468018 ATF7IPQ6VMQ6 1270 aa19.07■□□□□ 0.64
ATG4B-215ENST00000468018 LDHAL6AQ6ZMR3 332 aa19.07■□□□□ 0.64
ATG4B-215ENST00000468018 COA1Q9GZY4 146 aa19.07■□□□□ 0.64
ATG4B-215ENST00000468018 RIPOR2Q9Y4F9 1068 aa19.07■□□□□ 0.64
ATG4B-215ENST00000468018 TAF5LO75529 589 aa19.06■□□□□ 0.64
ATG4B-215ENST00000468018 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-215ENST00000468018 HIRAP54198 1017 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-215ENST00000468018 MICALL2Q8IY33 904 aa19.06■□□□□ 0.64
ATG4B-215ENST00000468018 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
ATG4B-215ENST00000468018 TRPM4Q8TD43 1214 aa19.06■□□□□ 0.64
ATG4B-215ENST00000468018 GMLQ99445 158 aa19.06■□□□□ 0.64
ATG4B-215ENST00000468018 PUS3Q9BZE2 481 aaKnown RBP19.06■□□□□ 0.64
ATG4B-215ENST00000468018 SNAP23O00161 211 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms