RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
UBR4-211ENST00000467272 ASTN2O75129 1339 aaPredicted RBP15.96■□□□□ 0.15
UBR4-211ENST00000467272 RPS8P62241 208 aaKnown RBP15.96■□□□□ 0.15
UBR4-211ENST00000467272 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
UBR4-211ENST00000467272 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
UBR4-211ENST00000467272 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
UBR4-211ENST00000467272 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
UBR4-211ENST00000467272 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
UBR4-211ENST00000467272 DBF4Q9UBU7 674 aaPredicted RBP15.95■□□□□ 0.14
UBR4-211ENST00000467272 HTTP42858 3142 aa15.95■□□□□ 0.14
UBR4-211ENST00000467272 ATP5J2-PTCD1G3V325 749 aa15.94■□□□□ 0.14
UBR4-211ENST00000467272 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
UBR4-211ENST00000467272 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
UBR4-211ENST00000467272 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
UBR4-211ENST00000467272 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
UBR4-211ENST00000467272 DCPSQ96C86 337 aaKnown RBP15.94■□□□□ 0.14
UBR4-211ENST00000467272 EYA3Q99504 573 aa15.94■□□□□ 0.14
UBR4-211ENST00000467272 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 ZNF853P0CG23 659 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 RALBP1Q15311 655 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 CDCA5Q96FF9 252 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 HYPKQ9NX55 129 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 GGA3Q9NZ52 723 aa15.93■□□□□ 0.14
UBR4-211ENST00000467272 TRPA1O75762 1119 aa15.92■□□□□ 0.14
UBR4-211ENST00000467272 RASAL3Q86YV0 1011 aa15.92■□□□□ 0.14
UBR4-211ENST00000467272 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
UBR4-211ENST00000467272 ZBTB38Q8NAP3 1195 aaPredicted RBP15.92■□□□□ 0.14
UBR4-211ENST00000467272 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
UBR4-211ENST00000467272 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
UBR4-211ENST00000467272 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
UBR4-211ENST00000467272 FKBP1BP68106 108 aa15.91■□□□□ 0.14
UBR4-211ENST00000467272 RBM26Q5T8P6 1007 aaKnown RBP15.91■□□□□ 0.14
UBR4-211ENST00000467272 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
UBR4-211ENST00000467272 CFAP44Q96MT7 982 aa15.91■□□□□ 0.14
UBR4-211ENST00000467272 PITPNM2Q9BZ72 1349 aa15.91■□□□□ 0.14
UBR4-211ENST00000467272 SCARF1Q14162 830 aa15.9■□□□□ 0.14
UBR4-211ENST00000467272 SULF1Q8IWU6 871 aa15.9■□□□□ 0.14
UBR4-211ENST00000467272 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
UBR4-211ENST00000467272 ANGEL2Q5VTE6 544 aaKnown RBP15.89■□□□□ 0.13
UBR4-211ENST00000467272 DUSP27Q5VZP5 1158 aa15.89■□□□□ 0.13
UBR4-211ENST00000467272 CTU1Q7Z7A3 348 aaKnown RBP15.89■□□□□ 0.13
UBR4-211ENST00000467272 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
UBR4-211ENST00000467272 PAPPA2Q9BXP8 1791 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 UFL1O94874 794 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 PCCAP05165 728 aaPredicted RBP15.88■□□□□ 0.13
UBR4-211ENST00000467272 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
UBR4-211ENST00000467272 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
UBR4-211ENST00000467272 CCDC146Q8IYE0 955 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 PSME4Q14997 1843 aa15.88■□□□□ 0.13
UBR4-211ENST00000467272 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
UBR4-211ENST00000467272 SOX10P56693 466 aa15.87■□□□□ 0.13
UBR4-211ENST00000467272 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
UBR4-211ENST00000467272 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
UBR4-211ENST00000467272 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
UBR4-211ENST00000467272 MYOZ2Q9NPC6 264 aa15.87■□□□□ 0.13
UBR4-211ENST00000467272 MKI67P46013 3256 aaKnown RBP15.87■□□□□ 0.13
UBR4-211ENST00000467272 ZNF646O15015 1829 aaPredicted RBP15.87■□□□□ 0.13
UBR4-211ENST00000467272 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 TM4SF4P48230 202 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 PODNQ7Z5L7 613 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 CFHR5Q9BXR6 569 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 ADAMTS8Q9UP79 889 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 XDHP47989 1333 aa15.86■□□□□ 0.13
UBR4-211ENST00000467272 PDE8AO60658 829 aa15.85■□□□□ 0.13
UBR4-211ENST00000467272 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
UBR4-211ENST00000467272 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
UBR4-211ENST00000467272 HPS5Q9UPZ3 1129 aa15.85■□□□□ 0.13
UBR4-211ENST00000467272 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
UBR4-211ENST00000467272 USP17L3A6NCW0 530 aa15.84■□□□□ 0.13
UBR4-211ENST00000467272 USP17L4A6NCW7 530 aa15.84■□□□□ 0.13
UBR4-211ENST00000467272 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
UBR4-211ENST00000467272 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
UBR4-211ENST00000467272 USP17L1Q7RTZ2 530 aa15.84■□□□□ 0.13
UBR4-211ENST00000467272 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
UBR4-211ENST00000467272 ATP2B4P23634 1241 aa15.83■□□□□ 0.12
UBR4-211ENST00000467272 PKN2Q16513 984 aaKnown RBP15.83■□□□□ 0.12
UBR4-211ENST00000467272 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
UBR4-211ENST00000467272 PRPF38BQ5VTL8 546 aaKnown RBP15.83■□□□□ 0.12
UBR4-211ENST00000467272 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.12
UBR4-211ENST00000467272 ZNF296Q8WUU4 475 aaPredicted RBP15.83■□□□□ 0.12
UBR4-211ENST00000467272 ZBED3Q96IU2 234 aaPredicted RBP15.83■□□□□ 0.12
UBR4-211ENST00000467272 METTL22Q9BUU2 404 aaPredicted RBP15.83■□□□□ 0.12
UBR4-211ENST00000467272 AKAP11Q9UKA4 1901 aa15.83■□□□□ 0.12
UBR4-211ENST00000467272 MED23Q9ULK4 1368 aa15.83■□□□□ 0.12
UBR4-211ENST00000467272 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 IGKV5-2P06315 115 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 MYD88Q99836 296 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
UBR4-211ENST00000467272 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 CWC25Q9NXE8 425 aaPredicted RBP15.82■□□□□ 0.12
UBR4-211ENST00000467272 MINPP1Q9UNW1 487 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 SCAF8Q9UPN6 1271 aaKnown RBP15.82■□□□□ 0.12
UBR4-211ENST00000467272 CENPFP49454 3210 aa15.82■□□□□ 0.12
UBR4-211ENST00000467272 BRCA2P51587 3418 aa15.81■□□□□ 0.12
UBR4-211ENST00000467272 WNT10BO00744 389 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms