RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	ST5	P78524	1137 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	CRY2	Q49AN0	593 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	METTL24	Q5JXM2	366 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	BICDL1	Q6ZP65	573 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	COL23A1	Q86Y22	540 aa	Predicted RBP	13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	MPHOSPH8	Q99549	860 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	BSDC1	Q9NW68	430 aa	Predicted RBP	13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	DOCK2	Q92608	1830 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	TAF1	P21675	1872 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	FAM177B	A6PVY3	158 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	POLRMT	O00411	1230 aa	Known RBP	13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	REC8	O95072	547 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	SERPINB2	P05120	415 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	FGFR2	P21802	821 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	CHML	P26374	656 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	RBM25	P49756	843 aa	Known RBP	13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	PUM3	Q15397	648 aa	Known RBP	13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	SLC15A2	Q16348	729 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	ATP2B3	Q16720	1220 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	PRR5L	Q6MZQ0	368 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	SMIM5	Q71RC9	77 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	ANKRD18A	Q8IVF6	992 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	IL27	Q8NEV9	243 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	LPIN2	Q92539	896 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	HAUS7	Q99871	368 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	DBNDD2	Q9BQY9	259 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	STK32B	Q9NY57	414 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	TLR7	Q9NYK1	1049 aa	Known RBP	13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	COL4A1	P02462	1669 aa		13.4	□□□□□ -0.26
MUC1-216	ENST00000467134	RAD50	Q92878	1312 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	TRIM6-TRIM34	B2RNG4	842 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	SEC24B	O95487	1268 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	DDR1	Q08345	913 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	TMC4	Q7Z404	712 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	DLEC1	Q9Y238	1755 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	MYH13	Q9UKX3	1938 aa		13.39	□□□□□ -0.27
MUC1-216	ENST00000467134	UQCRFS1P1	P0C7P4	283 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	HOXA10	P31260	410 aa	Predicted RBP	13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	EZH2	Q15910	746 aa	Known RBP	13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	CCDC158	Q5M9N0	1113 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	TSHZ3	Q63HK5	1081 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	C3orf67	Q6ZVT6	689 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	RUFY2	Q8WXA3	655 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	ESYT1	Q9BSJ8	1104 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	SEC31B	Q9NQW1	1179 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	SNRK	Q9NRH2	765 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	COL11A2	P13942	1736 aa	Predicted RBP	13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	LTBP1	Q14766	1721 aa		13.38	□□□□□ -0.27
MUC1-216	ENST00000467134	DUOX1	Q9NRD9	1551 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	KIF13B	Q9NQT8	1826 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	SLC5A1	P13866	664 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	RPS8	P62241	208 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	EN1	Q05925	392 aa	Predicted RBP	13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	UBE4A	Q14139	1066 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	DDX46	Q7L014	1031 aa	Known RBP	13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	SLC16A10	Q8TF71	515 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	XAGE2	Q96GT9	111 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	DDRGK1	Q96HY6	314 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	CRAMP1	Q96RY5	1269 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	ANKRD2	Q9GZV1	360 aa		13.37	□□□□□ -0.27
MUC1-216	ENST00000467134	NPHP1	O15259	732 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	ARID4A	P29374	1257 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	TIMM10	P62072	90 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	GRAP	Q13588	217 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	GRAPL	Q8TC17	118 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	RILPL2	Q969X0	211 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	IL17RA	Q96F46	866 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	NEUROD6	Q96NK8	337 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	BRIP1	Q9BX63	1249 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	C22orf23	Q9BZE7	217 aa		13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.36	□□□□□ -0.27
MUC1-216	ENST00000467134	IGSF3	O75054	1194 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	IFIT1	P09914	478 aa	Known RBP	13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	MFAP1	P55081	439 aa	Known RBP	13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	CHRND	Q07001	517 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	GORAB	Q5T7V8	394 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	KBTBD3	Q8NAB2	608 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	DIAPH3	Q9NSV4	1193 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	KIAA1551	Q9HCM1	1747 aa		13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	PDS5A	Q29RF7	1337 aa	Known RBP	13.35	□□□□□ -0.27
MUC1-216	ENST00000467134	SGSM2	O43147	1006 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	TTC39A	Q5SRH9	613 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	ILDR1	Q86SU0	546 aa	Predicted RBP	13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	RBM17	Q96I25	401 aa	Known RBP	13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	BCL11A	Q9H165	835 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	BOLA2	Q9H3K6	86 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	PAG1	Q9NWQ8	432 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	MINPP1	Q9UNW1	487 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	PARP3	Q9Y6F1	533 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	MAST2	Q6P0Q8	1798 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	ZNF804B	A4D1E1	1349 aa		13.34	□□□□□ -0.27
MUC1-216	ENST00000467134	SEMA3E	O15041	775 aa		13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	BBOX1	O75936	387 aa		13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	TTF1	Q15361	905 aa	Predicted RBP	13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	TMED8	Q6PL24	325 aa	Predicted RBP	13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	C15orf52	Q6ZUT6	534 aa	Known RBP	13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	RPGR	Q92834	1020 aa	Known RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms