RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MINPP1Q9UNW1 487 aa19.9■□□□□ 0.78
GPC1-207ENST00000466624 EYA2O00167 538 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 SIRT2Q8IXJ6 389 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
GPC1-207ENST00000466624 KLHDC4Q8TBB5 520 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 ANKRD2Q9GZV1 360 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
GPC1-207ENST00000466624 DUOX1Q9NRD9 1551 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 XDHP47989 1333 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 MROH5Q6ZUA9 1318 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 IRX6P78412 446 aaPredicted RBP19.88■□□□□ 0.77
GPC1-207ENST00000466624 PSMD1Q99460 953 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
GPC1-207ENST00000466624 SBF1O95248 1867 aa19.88■□□□□ 0.77
GPC1-207ENST00000466624 OLFM4Q6UX06 510 aa19.87■□□□□ 0.77
GPC1-207ENST00000466624 MPNDQ8N594 471 aa19.87■□□□□ 0.77
GPC1-207ENST00000466624 RTFDC1Q9BY42 306 aaPredicted RBP19.87■□□□□ 0.77
GPC1-207ENST00000466624 PUS3Q9BZE2 481 aaKnown RBP19.87■□□□□ 0.77
GPC1-207ENST00000466624 PA2G4Q9UQ80 394 aaKnown RBP19.87■□□□□ 0.77
GPC1-207ENST00000466624 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
GPC1-207ENST00000466624 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
GPC1-207ENST00000466624 DICER1Q9UPY3 1922 aaKnown RBP19.86■□□□□ 0.77
GPC1-207ENST00000466624 CCDC88AQ3V6T2 1871 aa19.86■□□□□ 0.77
GPC1-207ENST00000466624 IL15P40933 162 aaPredicted RBP19.86■□□□□ 0.77
GPC1-207ENST00000466624 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
GPC1-207ENST00000466624 CHRNDQ07001 517 aa19.86■□□□□ 0.77
GPC1-207ENST00000466624 LRRC24Q50LG9 513 aa19.86■□□□□ 0.77
GPC1-207ENST00000466624 DPP8Q6V1X1 898 aaPredicted RBP19.86■□□□□ 0.77
GPC1-207ENST00000466624 ATG9AQ7Z3C6 839 aa19.86■□□□□ 0.77
GPC1-207ENST00000466624 GOLGB1Q14789 3259 aaKnown RBP19.86■□□□□ 0.77
GPC1-207ENST00000466624 NFKBIEO00221 500 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 NEFLP07196 543 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 GPSM2P81274 684 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 TAOK3Q9H2K8 898 aa19.85■□□□□ 0.77
GPC1-207ENST00000466624 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
GPC1-207ENST00000466624 ATP2B4P23634 1241 aa19.84■□□□□ 0.77
GPC1-207ENST00000466624 SIL1Q9H173 461 aa19.84■□□□□ 0.77
GPC1-207ENST00000466624 VPS33BQ9H267 617 aa19.84■□□□□ 0.77
GPC1-207ENST00000466624 ANKIB1Q9P2G1 1089 aa19.84■□□□□ 0.77
GPC1-207ENST00000466624 LEMD3Q9Y2U8 911 aa19.84■□□□□ 0.77
GPC1-207ENST00000466624 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.77
GPC1-207ENST00000466624 G3BP1Q13283 466 aaKnown RBP eCLIP19.83■□□□□ 0.77
GPC1-207ENST00000466624 HSP90AB4PQ58FF6 505 aa19.83■□□□□ 0.77
GPC1-207ENST00000466624 ARHGAP27Q6ZUM4 889 aa19.83■□□□□ 0.77
GPC1-207ENST00000466624 VGLL2Q8N8G2 317 aa19.83■□□□□ 0.77
GPC1-207ENST00000466624 GGA1Q9UJY5 639 aa19.83■□□□□ 0.77
GPC1-207ENST00000466624 CHD4Q14839 1912 aa19.82■□□□□ 0.76
GPC1-207ENST00000466624 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
GPC1-207ENST00000466624 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
GPC1-207ENST00000466624 TBC1D16Q8TBP0 767 aa19.82■□□□□ 0.76
GPC1-207ENST00000466624 ARAP2Q8WZ64 1704 aa19.82■□□□□ 0.76
GPC1-207ENST00000466624 PDE8BO95263 885 aa19.81■□□□□ 0.76
GPC1-207ENST00000466624 ERC1Q8IUD2 1116 aa19.81■□□□□ 0.76
GPC1-207ENST00000466624 EYA3Q99504 573 aa19.81■□□□□ 0.76
GPC1-207ENST00000466624 CEP126Q9P2H0 1117 aa19.81■□□□□ 0.76
GPC1-207ENST00000466624 POLLQ9UGP5 575 aa19.81■□□□□ 0.76
GPC1-207ENST00000466624 ZNF804BA4D1E1 1349 aa19.8■□□□□ 0.76
GPC1-207ENST00000466624 UFL1O94874 794 aa19.8■□□□□ 0.76
GPC1-207ENST00000466624 UBE4AQ14139 1066 aa19.8■□□□□ 0.76
GPC1-207ENST00000466624 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
GPC1-207ENST00000466624 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
GPC1-207ENST00000466624 RAB11FIP3O75154 756 aa19.79■□□□□ 0.76
GPC1-207ENST00000466624 TAF5LO75529 589 aa19.79■□□□□ 0.76
GPC1-207ENST00000466624 RASSF7Q02833 373 aa19.79■□□□□ 0.76
GPC1-207ENST00000466624 C15orf52Q6ZUT6 534 aaKnown RBP19.79■□□□□ 0.76
GPC1-207ENST00000466624 HELBQ8NG08 1087 aaPredicted RBP19.79■□□□□ 0.76
GPC1-207ENST00000466624 C6orf229H3BNL8 230 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 SASH1O94885 1247 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 LMNB1P20700 586 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 IARSP41252 1262 aaKnown RBP19.78■□□□□ 0.76
GPC1-207ENST00000466624 KCNJ4P48050 445 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 OS9Q13438 667 aaPredicted RBP19.78■□□□□ 0.76
GPC1-207ENST00000466624 PUM3Q15397 648 aaKnown RBP19.78■□□□□ 0.76
GPC1-207ENST00000466624 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 RWDD1Q9H446 243 aaPredicted RBP19.78■□□□□ 0.76
GPC1-207ENST00000466624 GPR108Q9NPR9 543 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 EXOC6BQ9Y2D4 811 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 TIAM2Q8IVF5 1701 aa19.78■□□□□ 0.76
GPC1-207ENST00000466624 FGFR2P21802 821 aa19.77■□□□□ 0.76
GPC1-207ENST00000466624 TFCP2Q12800 502 aa19.77■□□□□ 0.76
GPC1-207ENST00000466624 WASHC4Q2M389 1173 aa19.77■□□□□ 0.76
GPC1-207ENST00000466624 AKAP2Q9Y2D5 859 aa19.77■□□□□ 0.76
GPC1-207ENST00000466624 IRS2Q9Y4H2 1338 aa19.76■□□□□ 0.75
GPC1-207ENST00000466624 LPIN2Q92539 896 aa19.76■□□□□ 0.75
GPC1-207ENST00000466624 KIF1BPQ96EK5 621 aa19.76■□□□□ 0.75
GPC1-207ENST00000466624 ZNF277Q9NRM2 450 aaPredicted RBP19.76■□□□□ 0.75
GPC1-207ENST00000466624 ZNF609O15014 1411 aa19.76■□□□□ 0.75
GPC1-207ENST00000466624 PPIP5K2O43314 1243 aa19.75■□□□□ 0.75
GPC1-207ENST00000466624 PRELPP51888 382 aa19.75■□□□□ 0.75
GPC1-207ENST00000466624 ATP2B3Q16720 1220 aa19.75■□□□□ 0.75
GPC1-207ENST00000466624 RHPN1Q8TCX5 695 aa19.75■□□□□ 0.75
GPC1-207ENST00000466624 GCC1Q96CN9 775 aa19.75■□□□□ 0.75
GPC1-207ENST00000466624 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
GPC1-207ENST00000466624 PSME4Q14997 1843 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms