RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TTC21BQ7Z4L5 1316 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 TOPAZ1Q8N9V7 1692 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
VPS41-211ENST00000466017 ATP9BO43861 1147 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 DKK1O94907 266 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 INHAP05111 366 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 ATF3P18847 181 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 ITGA6P23229 1130 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 PPP2R1AP30153 589 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 DBN1Q16643 649 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 CC2D1BQ5T0F9 858 aaKnown RBP7.36□□□□□ -1.23
VPS41-211ENST00000466017 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 NPAS3Q8IXF0 933 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 ZNF295-AS1Q8N0V1 137 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
VPS41-211ENST00000466017 USP6P35125 1406 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 MSH6P52701 1360 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 AATKQ6ZMQ8 1374 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 ZNF335Q9H4Z2 1342 aaPredicted RBP7.35□□□□□ -1.23
VPS41-211ENST00000466017 WIPF1O43516 503 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 LGR5O75473 907 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 GPC1P35052 558 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 GTF2IP78347 998 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 MORC1Q86VD1 984 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 WWC1Q8IX03 1113 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 NGDNQ8NEJ9 315 aaKnown RBP7.35□□□□□ -1.23
VPS41-211ENST00000466017 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
VPS41-211ENST00000466017 SLC16A10Q8TF71 515 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 KLRG1Q96E93 195 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 AKAP12Q02952 1782 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 C1orf167Q5SNV9 1468 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 MON2Q7Z3U7 1717 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 NALCNQ8IZF0 1738 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 MST1RQ04912 1400 aa7.35□□□□□ -1.23
VPS41-211ENST00000466017 SPATA31C2B4DYI2 1134 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 EML3Q32P44 896 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 TBCELQ5QJ74 424 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 IRF7Q92985 503 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
VPS41-211ENST00000466017 ZSCAN10Q96SZ4 725 aaPredicted RBP7.34□□□□□ -1.23
VPS41-211ENST00000466017 PPP1R12CQ9BZL4 782 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 ZMYND15Q9H091 742 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 ZNF358Q9NW07 568 aa7.34□□□□□ -1.23
VPS41-211ENST00000466017 MKRN1Q9UHC7 482 aaKnown RBP7.34□□□□□ -1.23
VPS41-211ENST00000466017 MAFBQ9Y5Q3 323 aaPredicted RBP7.34□□□□□ -1.23
VPS41-211ENST00000466017 GPR25O00155 361 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 PSME1Q06323 249 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 CCDC184Q52MB2 194 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 ESCO1Q5FWF5 840 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 PMFBP1Q8TBY8 1022 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
VPS41-211ENST00000466017 COG3Q96JB2 828 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 GAS2L1Q99501 681 aaPredicted RBP7.33□□□□□ -1.24
VPS41-211ENST00000466017 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
VPS41-211ENST00000466017 NOD1Q9Y239 953 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 PNPLA6Q8IY17 1366 aa7.33□□□□□ -1.24
VPS41-211ENST00000466017 XIRP1Q702N8 1843 aaKnown RBP7.32□□□□□ -1.24
VPS41-211ENST00000466017 LTBP4Q8N2S1 1624 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 CDC14CA4D256 554 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 SMTNP53814 917 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 TLR1Q15399 786 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 TNS4Q8IZW8 715 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 SLC4A9Q96Q91 983 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 SLAIN2Q9P270 581 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 HCN2Q9UL51 889 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 PARP3Q9Y6F1 533 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 RGPD8O14715 1765 aaPredicted RBP7.32□□□□□ -1.24
VPS41-211ENST00000466017 SBNO1A3KN83 1393 aa7.32□□□□□ -1.24
VPS41-211ENST00000466017 NPHP3Q7Z494 1330 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 OVOS2A0A0J9YW53 1432 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 SFI1A8K8P3 1242 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 EPHA4P54764 986 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 GAS6Q14393 721 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 OVOS2Q6IE36 1432 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 TAS1R3Q7RTX0 852 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 NME9Q86XW9 330 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
VPS41-211ENST00000466017 GPAMQ9HCL2 828 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 TIMMDC1Q9NPL8 285 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 ANKRD26Q9UPS8 1709 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 KIF1AQ12756 1690 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 KIF24Q5T7B8 1368 aa7.31□□□□□ -1.24
VPS41-211ENST00000466017 IQSEC2Q5JU85 1478 aa7.3□□□□□ -1.24
VPS41-211ENST00000466017 NRKQ7Z2Y5 1582 aa7.3□□□□□ -1.24
VPS41-211ENST00000466017 FOXO3O43524 673 aa7.3□□□□□ -1.24
VPS41-211ENST00000466017 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms