RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 HYAL2Q12891 473 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 CACTIN-AS1Q8N1I8 211 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 GPR152Q8TDT2 470 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 PBXIP1Q96AQ6 731 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 STIM2Q9P246 746 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
GARNL3-213ENST00000464616 SMNDC1O75940 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
GARNL3-213ENST00000464616 GRIK5Q16478 980 aa6.42□□□□□ -1.38
GARNL3-213ENST00000464616 OCLNQ16625 522 aa6.42□□□□□ -1.38
GARNL3-213ENST00000464616 TMEM164Q5U3C3 297 aa6.42□□□□□ -1.38
GARNL3-213ENST00000464616 MAP4K3Q8IVH8 894 aa6.42□□□□□ -1.38
GARNL3-213ENST00000464616 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
GARNL3-213ENST00000464616 SRA1Q9HD15 236 aaKnown RBP6.42□□□□□ -1.38
GARNL3-213ENST00000464616 ATP2B4P23634 1241 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 FAM117BQ6P1L5 589 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 CLP1Q92989 425 aaKnown RBP6.41□□□□□ -1.38
GARNL3-213ENST00000464616 AKTIPQ9H8T0 292 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 PPME1Q9Y570 386 aa6.41□□□□□ -1.38
GARNL3-213ENST00000464616 RPLP1P05386 114 aaKnown RBP6.4□□□□□ -1.38
GARNL3-213ENST00000464616 ITGB7P26010 798 aa6.4□□□□□ -1.38
GARNL3-213ENST00000464616 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.38
GARNL3-213ENST00000464616 LACRTQ9GZZ8 138 aa6.4□□□□□ -1.38
GARNL3-213ENST00000464616 GLB1P16278 677 aa6.39□□□□□ -1.39
GARNL3-213ENST00000464616 NOS3P29474 1203 aa6.39□□□□□ -1.39
GARNL3-213ENST00000464616 AAMPQ13685 434 aa6.39□□□□□ -1.39
GARNL3-213ENST00000464616 TRIP4Q15650 581 aaPredicted RBP6.39□□□□□ -1.39
GARNL3-213ENST00000464616 ERICH6Q7L0X2 663 aa6.39□□□□□ -1.39
GARNL3-213ENST00000464616 ABI2Q9NYB9 513 aaPredicted RBP6.39□□□□□ -1.39
GARNL3-213ENST00000464616 TRIM33Q9UPN9 1127 aa6.39□□□□□ -1.39
GARNL3-213ENST00000464616 DEAF1O75398 565 aaPredicted RBP6.38□□□□□ -1.39
GARNL3-213ENST00000464616 CDC25BP30305 580 aa6.38□□□□□ -1.39
GARNL3-213ENST00000464616 CAPN12Q6ZSI9 719 aa6.38□□□□□ -1.39
GARNL3-213ENST00000464616 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
GARNL3-213ENST00000464616 OR13H1Q8NG92 308 aa6.38□□□□□ -1.39
GARNL3-213ENST00000464616 LINC01387J3KSC0 135 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 DLL1O00548 723 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 HOXD8P13378 290 aaPredicted RBP6.37□□□□□ -1.39
GARNL3-213ENST00000464616 CDC27P30260 824 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 CABP4P57796 275 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 C8orf34Q49A92 452 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 ARTNQ5T4W7 220 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 MTMR7Q9Y216 660 aa6.37□□□□□ -1.39
GARNL3-213ENST00000464616 ARID3CA6NKF2 412 aa6.36□□□□□ -1.39
GARNL3-213ENST00000464616 TNFRSF10BO14763 440 aa6.36□□□□□ -1.39
GARNL3-213ENST00000464616 ALX3O95076 343 aa6.36□□□□□ -1.39
GARNL3-213ENST00000464616 PTPRAP18433 802 aa6.36□□□□□ -1.39
GARNL3-213ENST00000464616 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
GARNL3-213ENST00000464616 NUDT16Q96DE0 195 aaKnown RBP6.36□□□□□ -1.39
GARNL3-213ENST00000464616 MEGF10Q96KG7 1140 aa6.36□□□□□ -1.39
GARNL3-213ENST00000464616 CD68P34810 354 aaPredicted RBP6.35□□□□□ -1.39
GARNL3-213ENST00000464616 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
GARNL3-213ENST00000464616 ATP11AP98196 1134 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 LRP8Q14114 963 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 SETDB1Q15047 1291 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 NOM1Q5C9Z4 860 aaKnown RBP6.35□□□□□ -1.39
GARNL3-213ENST00000464616 PDE12Q6L8Q7 609 aaKnown RBP6.35□□□□□ -1.39
GARNL3-213ENST00000464616 TXNDC11Q6PKC3 985 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 PRR23CQ6ZRP0 262 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 TMEM130Q8N3G9 435 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
GARNL3-213ENST00000464616 RASSF4Q9H2L5 321 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 ELP3Q9H9T3 547 aa6.35□□□□□ -1.39
GARNL3-213ENST00000464616 F8W735 103 aaPredicted RBP6.34□□□□□ -1.39
GARNL3-213ENST00000464616 ZBTB39O15060 712 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 CES1P23141 567 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 FAM26DQ5JW98 314 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 ACAD11Q709F0 780 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 AGGF1Q8N302 714 aaeCLIP6.34□□□□□ -1.39
GARNL3-213ENST00000464616 EDEM1Q92611 657 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 PMEPA1Q969W9 287 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 PBX4Q9BYU1 374 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 CEP41Q9BYV8 373 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 SEPT3Q9UH03 358 aa6.34□□□□□ -1.39
GARNL3-213ENST00000464616 SART1O43290 800 aaKnown RBP6.33□□□□□ -1.4
GARNL3-213ENST00000464616 ARL4DP49703 201 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 DUOXA2Q1HG44 320 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 ALKBH2Q6NS38 261 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 ATCAYQ86WG3 371 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 KANSL3Q9P2N6 904 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 GTF3C3Q9Y5Q9 886 aa6.33□□□□□ -1.4
GARNL3-213ENST00000464616 GSC2O15499 205 aa6.32□□□□□ -1.4
GARNL3-213ENST00000464616 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
GARNL3-213ENST00000464616 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
GARNL3-213ENST00000464616 COL13A1Q5TAT6 717 aaPredicted RBP6.32□□□□□ -1.4
GARNL3-213ENST00000464616 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
GARNL3-213ENST00000464616 SLC51AQ86UW1 340 aa6.32□□□□□ -1.4
GARNL3-213ENST00000464616 CARD10Q9BWT7 1032 aa6.32□□□□□ -1.4
GARNL3-213ENST00000464616 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
GARNL3-213ENST00000464616 STOML1Q9UBI4 398 aa6.32□□□□□ -1.4
GARNL3-213ENST00000464616 FSCN2O14926 492 aa6.31□□□□□ -1.4
GARNL3-213ENST00000464616 CYP2E1P05181 493 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-213ENST00000464616 DZIP1LQ8IYY4 767 aaKnown RBP6.31□□□□□ -1.4
GARNL3-213ENST00000464616 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 268.6 ms