RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 CAPNS2Q96L46 248 aa30.95■■■□□ 2.55
TTC3-212ENST00000463216 ZC3H12CQ9C0D7 883 aaKnown RBP30.95■■■□□ 2.55
TTC3-212ENST00000463216 PI4KAP2A4QPH2 592 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 UFL1O94874 794 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 KSR2Q6VAB6 950 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 WWC1Q8IX03 1113 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 PI4KAP1Q8N8J0 262 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 KCNQ5Q9NR82 932 aa30.94■■■□□ 2.54
TTC3-212ENST00000463216 ECE1P42892 770 aa30.93■■■□□ 2.54
TTC3-212ENST00000463216 MAP2K1Q02750 393 aaPredicted RBP30.92■■■□□ 2.54
TTC3-212ENST00000463216 TWISTNBQ3B726 338 aaPredicted RBP30.92■■■□□ 2.54
TTC3-212ENST00000463216 SAMD7Q7Z3H4 446 aa30.92■■■□□ 2.54
TTC3-212ENST00000463216 ZC3H15Q8WU90 426 aaKnown RBP30.92■■■□□ 2.54
TTC3-212ENST00000463216 MRS2Q9HD23 443 aa30.92■■■□□ 2.54
TTC3-212ENST00000463216 SALL2Q9Y467 1007 aaPredicted RBP30.92■■■□□ 2.54
TTC3-212ENST00000463216 TLL2Q9Y6L7 1015 aa30.92■■■□□ 2.54
TTC3-212ENST00000463216 LBX1P52954 281 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 NEXNQ0ZGT2 675 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 CCDC27Q2M243 656 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 TBC1D10BQ4KMP7 808 aaPredicted RBP30.91■■■□□ 2.54
TTC3-212ENST00000463216 RBM26Q5T8P6 1007 aaKnown RBP30.91■■■□□ 2.54
TTC3-212ENST00000463216 ANKRD18AQ8IVF6 992 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 PGAP2Q9UHJ9 254 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 GGA1Q9UJY5 639 aa30.91■■■□□ 2.54
TTC3-212ENST00000463216 CDC37L1Q7L3B6 337 aa30.9■■■□□ 2.54
TTC3-212ENST00000463216 DPF2Q92785 391 aa30.9■■■□□ 2.54
TTC3-212ENST00000463216 PRDM10Q9NQV6 1147 aa30.9■■■□□ 2.54
TTC3-212ENST00000463216 PODXL2Q9NZ53 605 aa30.89■■■□□ 2.54
TTC3-212ENST00000463216 SLC4A2P04920 1241 aa30.88■■■□□ 2.53
TTC3-212ENST00000463216 IGKV5-2P06315 115 aa30.88■■■□□ 2.53
TTC3-212ENST00000463216 G2E3Q7L622 706 aa30.88■■■□□ 2.53
TTC3-212ENST00000463216 USP48Q86UV5 1035 aa30.88■■■□□ 2.53
TTC3-212ENST00000463216 RTL9Q8NET4 1388 aa30.88■■■□□ 2.53
TTC3-212ENST00000463216 ANP32CO43423 234 aa30.87■■■□□ 2.53
TTC3-212ENST00000463216 CWF19L2Q2TBE0 894 aaKnown RBP30.87■■■□□ 2.53
TTC3-212ENST00000463216 BEGAINQ9BUH8 593 aa30.87■■■□□ 2.53
TTC3-212ENST00000463216 RPS12P25398 132 aaKnown RBP30.86■■■□□ 2.53
TTC3-212ENST00000463216 CTSWP56202 376 aa30.86■■■□□ 2.53
TTC3-212ENST00000463216 SAPCD2Q86UD0 394 aa30.86■■■□□ 2.53
TTC3-212ENST00000463216 AOC2O75106 756 aa30.85■■■□□ 2.53
TTC3-212ENST00000463216 EGFRP00533 1210 aa30.85■■■□□ 2.53
TTC3-212ENST00000463216 HSPA8P11142 646 aaKnown RBP30.84■■■□□ 2.53
TTC3-212ENST00000463216 ZEB1P37275 1124 aaPredicted RBP30.84■■■□□ 2.53
TTC3-212ENST00000463216 DLK2Q6UY11 383 aa30.84■■■□□ 2.53
TTC3-212ENST00000463216 CDC5LQ99459 802 aaKnown RBP30.84■■■□□ 2.53
TTC3-212ENST00000463216 SCN9AQ15858 1988 aa30.84■■■□□ 2.53
TTC3-212ENST00000463216 XDHP47989 1333 aa30.83■■■□□ 2.53
TTC3-212ENST00000463216 POLR2AP24928 1970 aaKnown RBP30.83■■■□□ 2.53
TTC3-212ENST00000463216 SPEF2Q9C093 1822 aa30.82■■■□□ 2.52
TTC3-212ENST00000463216 IL16Q14005 1332 aa30.82■■■□□ 2.52
TTC3-212ENST00000463216 NEURL1BA8MQ27 555 aa30.82■■■□□ 2.52
TTC3-212ENST00000463216 MYH3P11055 1940 aa30.82■■■□□ 2.52
TTC3-212ENST00000463216 VIL1P09327 827 aaKnown RBP30.81■■■□□ 2.52
TTC3-212ENST00000463216 KIF4BQ2VIQ3 1234 aa30.81■■■□□ 2.52
TTC3-212ENST00000463216 UBE3BQ7Z3V4 1068 aa30.81■■■□□ 2.52
TTC3-212ENST00000463216 KRT26Q7Z3Y9 468 aa30.81■■■□□ 2.52
TTC3-212ENST00000463216 TTLL11Q8NHH1 800 aa30.81■■■□□ 2.52
TTC3-212ENST00000463216 DCPSQ96C86 337 aaKnown RBP30.81■■■□□ 2.52
TTC3-212ENST00000463216 GREM2Q9H772 168 aa30.81■■■□□ 2.52
TTC3-212ENST00000463216 ATP2B4P23634 1241 aa30.8■■■□□ 2.52
TTC3-212ENST00000463216 FANCIQ9NVI1 1328 aa30.79■■■□□ 2.52
TTC3-212ENST00000463216 ZNF316A6NFI3 1004 aaPredicted RBP30.79■■■□□ 2.52
TTC3-212ENST00000463216 FLIIQ13045 1269 aa30.79■■■□□ 2.52
TTC3-212ENST00000463216 FKBP5Q13451 457 aaPredicted RBP30.79■■■□□ 2.52
TTC3-212ENST00000463216 THSD7BQ9C0I4 1608 aa30.78■■■□□ 2.52
TTC3-212ENST00000463216 ADM5C9JUS6 153 aa30.78■■■□□ 2.52
TTC3-212ENST00000463216 MAP2K2P36507 400 aa30.77■■■□□ 2.52
TTC3-212ENST00000463216 TSKSQ9UJT2 592 aa30.77■■■□□ 2.52
TTC3-212ENST00000463216 WTIPA6NIX2 430 aaPredicted RBP30.76■■■□□ 2.51
TTC3-212ENST00000463216 HUNKP57058 714 aa30.76■■■□□ 2.51
TTC3-212ENST00000463216 RSBN1LQ6PCB5 846 aaPredicted RBP30.76■■■□□ 2.51
TTC3-212ENST00000463216 BSDC1Q9NW68 430 aaPredicted RBP30.76■■■□□ 2.51
TTC3-212ENST00000463216 MINPP1Q9UNW1 487 aa30.76■■■□□ 2.51
TTC3-212ENST00000463216 H7C1W4 665 aa30.75■■■□□ 2.51
TTC3-212ENST00000463216 FBXW7Q969H0 707 aa30.75■■■□□ 2.51
TTC3-212ENST00000463216 HHIPL1Q96JK4 782 aa30.75■■■□□ 2.51
TTC3-212ENST00000463216 GGA3Q9NZ52 723 aa30.75■■■□□ 2.51
TTC3-212ENST00000463216 IGHMBP2P38935 993 aaKnown RBP30.74■■■□□ 2.51
TTC3-212ENST00000463216 GCKRQ14397 625 aa30.74■■■□□ 2.51
TTC3-212ENST00000463216 DNAAF4Q8WXU2 420 aa30.74■■■□□ 2.51
TTC3-212ENST00000463216 MYH16Q9H6N6 1097 aa30.74■■■□□ 2.51
TTC3-212ENST00000463216 EXOSC9Q06265 439 aaKnown RBP30.73■■■□□ 2.51
TTC3-212ENST00000463216 NCBP3Q53F19 620 aaKnown RBP30.73■■■□□ 2.51
TTC3-212ENST00000463216 WDR63Q8IWG1 891 aa30.73■■■□□ 2.51
TTC3-212ENST00000463216 SULF1Q8IWU6 871 aa30.73■■■□□ 2.51
TTC3-212ENST00000463216 AGBL3Q8NEM8 1001 aa30.73■■■□□ 2.51
TTC3-212ENST00000463216 ASTN2O75129 1339 aaPredicted RBP30.73■■■□□ 2.51
TTC3-212ENST00000463216 USP17L3A6NCW0 530 aa30.72■■■□□ 2.51
TTC3-212ENST00000463216 USP17L4A6NCW7 530 aa30.72■■■□□ 2.51
TTC3-212ENST00000463216 VAMP4O75379 141 aa30.72■■■□□ 2.51
TTC3-212ENST00000463216 USP17L1Q7RTZ2 530 aa30.72■■■□□ 2.51
TTC3-212ENST00000463216 C2orf69Q8N8R5 385 aa30.72■■■□□ 2.51
TTC3-212ENST00000463216 GBA2Q9HCG7 927 aaPredicted RBP30.72■■■□□ 2.51
TTC3-212ENST00000463216 CCT4P50991 539 aaKnown RBP30.71■■■□□ 2.51
TTC3-212ENST00000463216 PODNQ7Z5L7 613 aa30.71■■■□□ 2.51
TTC3-212ENST00000463216 FAM9BQ8IZU0 186 aa30.71■■■□□ 2.51
TTC3-212ENST00000463216 ITGA6P23229 1130 aa30.7■■■□□ 2.51
TTC3-212ENST00000463216 SCARF1Q14162 830 aa30.7■■■□□ 2.51
TTC3-212ENST00000463216 FAM161AQ3B820 660 aa30.7■■■□□ 2.51
TTC3-212ENST00000463216 MPHOSPH8Q99549 860 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms