RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PTPDC1A2A3K4 754 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 ALDH1L1O75891 902 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 HSP90AA4PQ58FG1 418 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 GPR161Q8N6U8 529 aaKnown RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 AKR1B15C9JRZ8 316 aaPredicted RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 ARHGAP6O43182 974 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 MARCKSP29966 332 aaPredicted RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 NSRP1Q9H0G5 558 aaKnown RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 NUTM2AQ8IVF1 878 aaPredicted RBP18.03■□□□□ 0.48
SMC4-204ENST00000462787 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 DNMT1P26358 1616 aaKnown RBP18.03■□□□□ 0.48
SMC4-204ENST00000462787 TMEM67Q5HYA8 995 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 RRAGBQ5VZM2 374 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 CCDC114Q96M63 670 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 SSH2Q76I76 1423 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 IFI16Q16666 785 aaKnown RBP18.03■□□□□ 0.48
SMC4-204ENST00000462787 CCDC96Q2M329 555 aa18.03■□□□□ 0.48
SMC4-204ENST00000462787 MSH6P52701 1360 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 SGSM2O43147 1006 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 PPFIA3O75145 1194 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 ERBB4Q15303 1308 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 ANKRD62A6NC57 917 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 WDHD1O75717 1129 aaPredicted RBP18.02■□□□□ 0.48
SMC4-204ENST00000462787 FANCCQ00597 558 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 AMPD3Q01432 767 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 DRC1Q96MC2 740 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 SLC26A6Q9BXS9 759 aa18.02■□□□□ 0.48
SMC4-204ENST00000462787 A0A1B0GUA9 196 aa18.02■□□□□ 0.47
SMC4-204ENST00000462787 PKP1Q13835 747 aa18.02■□□□□ 0.47
SMC4-204ENST00000462787 BRD3Q15059 726 aa18.02■□□□□ 0.47
SMC4-204ENST00000462787 ANKS4BQ8N8V4 417 aa18.02■□□□□ 0.47
SMC4-204ENST00000462787 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.47
SMC4-204ENST00000462787 KIF5AQ12840 1032 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 DHX32Q7L7V1 743 aaKnown RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 LRP2BPQ9P2M1 347 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 PPP1R12BO60237 982 aaPredicted RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 INPP5BP32019 993 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.477e-7■■□□□ 12.7
SMC4-204ENST00000462787 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 RPS6KB1P23443 525 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 NAPGQ99747 312 aaPredicted RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 PRM3Q9NNZ6 103 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 TTF2Q9UNY4 1162 aaKnown RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 ATP2C2O75185 946 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 GSPT1P15170 499 aaKnown RBP18.01■□□□□ 0.47
SMC4-204ENST00000462787 VAV2P52735 878 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 PYCARDQ9ULZ3 195 aa18.01■□□□□ 0.47
SMC4-204ENST00000462787 ZFYP08048 801 aaPredicted RBP18■□□□□ 0.47
SMC4-204ENST00000462787 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
SMC4-204ENST00000462787 MRFAP1L1Q96HT8 127 aa18■□□□□ 0.47
SMC4-204ENST00000462787 POLKQ9UBT6 870 aa18■□□□□ 0.47
SMC4-204ENST00000462787 KIAA1524Q8TCG1 905 aa18■□□□□ 0.47
SMC4-204ENST00000462787 ATP8B1O43520 1251 aa18■□□□□ 0.47
SMC4-204ENST00000462787 MYO1BO43795 1136 aa18■□□□□ 0.47
SMC4-204ENST00000462787 HAND2P61296 217 aa18■□□□□ 0.47
SMC4-204ENST00000462787 MAP3K12Q12852 859 aa18■□□□□ 0.47
SMC4-204ENST00000462787 RSRC1Q96IZ7 334 aaKnown RBP18■□□□□ 0.47
SMC4-204ENST00000462787 GUCA1BQ9UMX6 200 aa18■□□□□ 0.47
SMC4-204ENST00000462787 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
SMC4-204ENST00000462787 RAB34Q9BZG1 259 aa18■□□□□ 0.47
SMC4-204ENST00000462787 RAPGEF6Q8TEU7 1601 aa18■□□□□ 0.47
SMC4-204ENST00000462787 A0A1B0GVL5 298 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 CPA1P15085 419 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 ERCC6LQ2NKX8 1250 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 IQCA1Q86XH1 822 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 TMCO5BA8MYB1 307 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 ZEB2O60315 1214 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 NLRP5P59047 1200 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 ESCO1Q5FWF5 840 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 GOLGA5Q8TBA6 731 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 A2MP01023 1474 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 A0A087WZG4 1122 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 ZBTB43O43298 467 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
SMC4-204ENST00000462787 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 TM6SF1Q9BZW5 370 aa17.99■□□□□ 0.47
SMC4-204ENST00000462787 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 AFMP43652 599 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
SMC4-204ENST00000462787 CCDC155Q8N6L0 562 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 EFCAB8A8MWE9 144 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 CETN2P41208 172 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 LRMPQ12912 555 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 CATIPQ7Z7H3 387 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 LRRC8AQ8IWT6 810 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 USP19O94966 1318 aa17.98■□□□□ 0.47
SMC4-204ENST00000462787 UBA7P41226 1012 aa17.97■□□□□ 0.47
SMC4-204ENST00000462787 NLRP12P59046 1061 aa17.97■□□□□ 0.47
SMC4-204ENST00000462787 TCP11L1Q9NUJ3 509 aa17.97■□□□□ 0.47
SMC4-204ENST00000462787 ARHGAP25P42331 645 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 227.7 ms