RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 RTL9Q8NET4 1388 aa15.35■□□□□ 0.05
PCYT1A-213ENST00000460827 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 RPS12P25398 132 aaKnown RBP15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 ASTN2O75129 1339 aaPredicted RBP15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 SH3TC1Q8TE82 1336 aa15.34■□□□□ 0.05
PCYT1A-213ENST00000460827 TCIRG1Q13488 830 aa15.33■□□□□ 0.04
PCYT1A-213ENST00000460827 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
PCYT1A-213ENST00000460827 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
PCYT1A-213ENST00000460827 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
PCYT1A-213ENST00000460827 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
PCYT1A-213ENST00000460827 KIAA0100Q14667 2235 aaKnown RBP15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 ECE2O60344 883 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 NSFL1CQ9UNZ2 370 aaKnown RBP15.32■□□□□ 0.04
PCYT1A-213ENST00000460827 NEFMP07197 916 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 GPSM2P81274 684 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 DOK7Q18PE1 504 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 SULF1Q8IWU6 871 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 CDCA5Q96FF9 252 aa15.31■□□□□ 0.04
PCYT1A-213ENST00000460827 C6orf229H3BNL8 230 aa15.3■□□□□ 0.04
PCYT1A-213ENST00000460827 VIL1P09327 827 aaKnown RBP15.3■□□□□ 0.04
PCYT1A-213ENST00000460827 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
PCYT1A-213ENST00000460827 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
PCYT1A-213ENST00000460827 A0A0C4DFX4 3053 aa15.3■□□□□ 0.04
PCYT1A-213ENST00000460827 PSME4Q14997 1843 aa15.29■□□□□ 0.04
PCYT1A-213ENST00000460827 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
PCYT1A-213ENST00000460827 SF3B3Q15393 1217 aaKnown RBP15.29■□□□□ 0.04
PCYT1A-213ENST00000460827 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
PCYT1A-213ENST00000460827 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
PCYT1A-213ENST00000460827 TBC1D16Q8TBP0 767 aa15.28■□□□□ 0.04
PCYT1A-213ENST00000460827 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
PCYT1A-213ENST00000460827 ZNF609O15014 1411 aa15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 ZNF280AP59817 542 aaPredicted RBP15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 ANGEL2Q5VTE6 544 aaKnown RBP15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 FAM89AQ96GI7 184 aa15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 EYA3Q99504 573 aa15.27■□□□□ 0.04
PCYT1A-213ENST00000460827 SZT2Q5T011 3432 aa15.27■□□□□ 0.03
PCYT1A-213ENST00000460827 RANBP2P49792 3224 aaKnown RBP15.26■□□□□ 0.03
PCYT1A-213ENST00000460827 FKBP1BP68106 108 aa15.26■□□□□ 0.03
PCYT1A-213ENST00000460827 SCARF1Q14162 830 aa15.26■□□□□ 0.03
PCYT1A-213ENST00000460827 ISCA1Q9BUE6 129 aa15.26■□□□□ 0.03
PCYT1A-213ENST00000460827 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
PCYT1A-213ENST00000460827 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
PCYT1A-213ENST00000460827 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
PCYT1A-213ENST00000460827 GMLQ99445 158 aa15.25■□□□□ 0.03
PCYT1A-213ENST00000460827 MAPK8IP3Q9UPT6 1336 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 RPS8P62241 208 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 ZC3H12CQ9C0D7 883 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 PODXL2Q9NZ53 605 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 TRIOBPQ9H2D6 2365 aa15.24■□□□□ 0.03
PCYT1A-213ENST00000460827 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 GPR25O00155 361 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 TM4SF4P48230 202 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 NOM1Q5C9Z4 860 aaKnown RBP15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 CHPF2Q9P2E5 772 aa15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 SCAF8Q9UPN6 1271 aaKnown RBP15.23■□□□□ 0.03
PCYT1A-213ENST00000460827 UFL1O94874 794 aa15.22■□□□□ 0.03
PCYT1A-213ENST00000460827 RIPK4P57078 832 aa15.22■□□□□ 0.03
PCYT1A-213ENST00000460827 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
PCYT1A-213ENST00000460827 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
PCYT1A-213ENST00000460827 MYOZ2Q9NPC6 264 aa15.22■□□□□ 0.03
PCYT1A-213ENST00000460827 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
PCYT1A-213ENST00000460827 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
PCYT1A-213ENST00000460827 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
PCYT1A-213ENST00000460827 PNNQ9H307 717 aaKnown RBP15.21■□□□□ 0.03
PCYT1A-213ENST00000460827 SEC31BQ9NQW1 1179 aa15.21■□□□□ 0.03
PCYT1A-213ENST00000460827 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 TRIM28Q13263 835 aaKnown RBP15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 CFHR5Q9BXR6 569 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 R3HDMLQ9H3Y0 253 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 ANKIB1Q9P2G1 1089 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
PCYT1A-213ENST00000460827 G3V3G9 751 aa15.19■□□□□ 0.02
PCYT1A-213ENST00000460827 CHL1O00533 1208 aa15.19■□□□□ 0.02
PCYT1A-213ENST00000460827 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
PCYT1A-213ENST00000460827 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
PCYT1A-213ENST00000460827 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
PCYT1A-213ENST00000460827 HABP4Q5JVS0 413 aaKnown RBP15.18■□□□□ 0.02
PCYT1A-213ENST00000460827 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
PCYT1A-213ENST00000460827 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms