RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 SNX21Q969T3 373 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 HCLS1P14317 486 aaPredicted RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 LUC7LQ9NQ29 371 aaKnown RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 RNF17Q9BXT8 1623 aaKnown RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 TRAF1Q13077 416 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 DENND2AQ9ULE3 1009 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 PUM3Q15397 648 aaKnown RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 SUCLG2Q96I99 432 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 TCIRG1Q13488 830 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
CHRD-208ENST00000460627 ANO10Q9NW15 660 aa20.49■□□□□ 0.87
CHRD-208ENST00000460627 SLC26A6Q9BXS9 759 aa20.48■□□□□ 0.87
CHRD-208ENST00000460627 TSPY3P0CV98 308 aa20.48■□□□□ 0.87
CHRD-208ENST00000460627 TSPY8P0CW00 308 aa20.48■□□□□ 0.87
CHRD-208ENST00000460627 SYCP1Q15431 976 aa20.48■□□□□ 0.87
CHRD-208ENST00000460627 TIMM10P62072 90 aa20.48■□□□□ 0.87
CHRD-208ENST00000460627 ABCC4O15439 1325 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 IFIT1BQ5T764 474 aaKnown RBP20.47■□□□□ 0.87
CHRD-208ENST00000460627 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 WDR17Q8IZU2 1322 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 LDHBP07195 334 aaKnown RBP20.47■□□□□ 0.87
CHRD-208ENST00000460627 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 TANGO6Q9C0B7 1094 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 ERBB3P21860 1342 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 SYCE3A1L190 88 aa20.47■□□□□ 0.87
CHRD-208ENST00000460627 TTLL12Q14166 644 aaPredicted RBP20.46■□□□□ 0.87
CHRD-208ENST00000460627 SPC24Q8NBT2 197 aa20.46■□□□□ 0.87
CHRD-208ENST00000460627 HELLSQ9NRZ9 838 aa20.46■□□□□ 0.87
CHRD-208ENST00000460627 RTN1Q16799 776 aa20.46■□□□□ 0.87
CHRD-208ENST00000460627 MAGEB6Q8N7X4 407 aa20.46■□□□□ 0.87
CHRD-208ENST00000460627 KCNQ3O43525 872 aa20.46■□□□□ 0.87
CHRD-208ENST00000460627 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
CHRD-208ENST00000460627 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 TCEANC2Q96MN5 208 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 DBNDD2Q9BQY9 259 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 F8W031 263 aaPredicted RBP20.45■□□□□ 0.86
CHRD-208ENST00000460627 PRC1O43663 620 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 RBM27Q9P2N5 1060 aaKnown RBP20.45■□□□□ 0.86
CHRD-208ENST00000460627 TFIP11Q9UBB9 837 aaKnown RBP20.45■□□□□ 0.86
CHRD-208ENST00000460627 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
CHRD-208ENST00000460627 Q6ZUG5 572 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 TXLNBQ8N3L3 684 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 NECAB1Q8N987 351 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 FSIP1Q8NA03 581 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 PYM1Q9BRP8 204 aaKnown RBP20.44■□□□□ 0.86
CHRD-208ENST00000460627 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 CDK12Q9NYV4 1490 aaPredicted RBP20.44■□□□□ 0.86
CHRD-208ENST00000460627 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
CHRD-208ENST00000460627 LRRC2Q9BYS8 371 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 ARGLU1Q9NWB6 273 aaPredicted RBP20.44■□□□□ 0.86
CHRD-208ENST00000460627 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
CHRD-208ENST00000460627 ZNF335Q9H4Z2 1342 aaPredicted RBP20.43■□□□□ 0.86
CHRD-208ENST00000460627 BMP15O95972 392 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 CALM1P0DP23 149 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 CALM2P0DP24 149 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 CALM3P0DP25 149 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 CAMK4Q16566 473 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 ZSCAN22P10073 491 aaPredicted RBP20.43■□□□□ 0.86
CHRD-208ENST00000460627 LPIN2Q92539 896 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
CHRD-208ENST00000460627 DHX32Q7L7V1 743 aaKnown RBP20.43■□□□□ 0.86
CHRD-208ENST00000460627 RAB11FIP4Q86YS3 637 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 CCDC148Q8NFR7 591 aa20.43■□□□□ 0.86
CHRD-208ENST00000460627 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 MCM9Q9NXL9 1143 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 CNNM3Q8NE01 707 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 KLHDC4Q8TBB5 520 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 KDRP35968 1356 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 XAGE2Q96GT9 111 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 ALG1Q9BT22 464 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 LMTK2Q8IWU2 1503 aa20.42■□□□□ 0.86
CHRD-208ENST00000460627 ZFYVE27Q5T4F4 411 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 MIGA1Q8NAN2 632 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 KIF20AO95235 890 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
CHRD-208ENST00000460627 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 DEF6Q9H4E7 631 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 PPP1R12BO60237 982 aaPredicted RBP20.41■□□□□ 0.86
CHRD-208ENST00000460627 PDCL3Q9H2J4 239 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 UBE2HP62256 183 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 APPBP2Q92624 585 aa20.41■□□□□ 0.86
CHRD-208ENST00000460627 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
CHRD-208ENST00000460627 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
CHRD-208ENST00000460627 USP26Q9BXU7 913 aa20.4■□□□□ 0.86
CHRD-208ENST00000460627 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
CHRD-208ENST00000460627 UBA7P41226 1012 aa20.4■□□□□ 0.86
CHRD-208ENST00000460627 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
CHRD-208ENST00000460627 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms