RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 CIAO1O76071 339 aa20.41■□□□□ 0.86
YIPF3-205ENST00000460547 PCCAP05165 728 aaPredicted RBP20.41■□□□□ 0.86
YIPF3-205ENST00000460547 NEK4P51957 841 aa20.41■□□□□ 0.86
YIPF3-205ENST00000460547 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
YIPF3-205ENST00000460547 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
YIPF3-205ENST00000460547 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
YIPF3-205ENST00000460547 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
YIPF3-205ENST00000460547 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 TGFB2P61812 414 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 DDR1Q08345 913 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 NFIXQ14938 502 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 HSP90AB3PQ58FF7 597 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
YIPF3-205ENST00000460547 FBXO3Q9UK99 471 aa20.4■□□□□ 0.86
YIPF3-205ENST00000460547 POLRMTO00411 1230 aaKnown RBP20.39■□□□□ 0.86
YIPF3-205ENST00000460547 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.86
YIPF3-205ENST00000460547 CLEC17AQ6ZS10 378 aa20.39■□□□□ 0.86
YIPF3-205ENST00000460547 ATG9AQ7Z3C6 839 aa20.39■□□□□ 0.86
YIPF3-205ENST00000460547 TNPO1Q92973 898 aaKnown RBP20.38■□□□□ 0.85
YIPF3-205ENST00000460547 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
YIPF3-205ENST00000460547 SERPINB2P05120 415 aa20.38■□□□□ 0.85
YIPF3-205ENST00000460547 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
YIPF3-205ENST00000460547 KCNB2Q92953 911 aa20.38■□□□□ 0.85
YIPF3-205ENST00000460547 GBP4Q96PP9 640 aa20.38■□□□□ 0.85
YIPF3-205ENST00000460547 ZNF609O15014 1411 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 NUCB2P80303 420 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 CUL4AQ13619 759 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
YIPF3-205ENST00000460547 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 SNX14Q9Y5W7 946 aa20.37■□□□□ 0.85
YIPF3-205ENST00000460547 MED23Q9ULK4 1368 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 ERVV-1B6SEH8 477 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 EYA2O00167 538 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 TBC1D9BQ66K14 1250 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 ZNF652Q9Y2D9 606 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 CHMP3Q9Y3E7 222 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 CCDC171Q6TFL3 1326 aa20.36■□□□□ 0.85
YIPF3-205ENST00000460547 CYP2E1P05181 493 aaPredicted RBP20.35■□□□□ 0.85
YIPF3-205ENST00000460547 CLEC4GQ6UXB4 293 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 TMX3Q96JJ7 454 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 FSD1Q9BTV5 496 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 WWC3Q9ULE0 1092 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 A0A0G2JLW4 131 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 CSF1RP07333 972 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 PTMSP20962 102 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 HAUS7Q99871 368 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 DBNDD2Q9BQY9 259 aa20.35■□□□□ 0.85
YIPF3-205ENST00000460547 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
YIPF3-205ENST00000460547 NLRP10Q86W26 655 aa20.34■□□□□ 0.85
YIPF3-205ENST00000460547 INTS4Q96HW7 963 aaKnown RBP20.34■□□□□ 0.85
YIPF3-205ENST00000460547 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
YIPF3-205ENST00000460547 NPHP1O15259 732 aa20.33■□□□□ 0.85
YIPF3-205ENST00000460547 YY1P25490 414 aa20.33■□□□□ 0.85
YIPF3-205ENST00000460547 DPEP1P16444 411 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 YBX3P16989 372 aaKnown RBP eCLIP20.32■□□□□ 0.842e-8■■■■□ 22.5
YIPF3-205ENST00000460547 PTH1RQ03431 593 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 FAM227BQ96M60 508 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 TM6SF1Q9BZW5 370 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 HLFQ16534 295 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 TTC14Q96N46 770 aa20.32■□□□□ 0.84
YIPF3-205ENST00000460547 A0A0D9SFI3 127 aa20.31■□□□□ 0.84
YIPF3-205ENST00000460547 RGL2O15211 777 aa20.31■□□□□ 0.84
YIPF3-205ENST00000460547 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
YIPF3-205ENST00000460547 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
YIPF3-205ENST00000460547 LRRC24Q50LG9 513 aa20.3■□□□□ 0.84
YIPF3-205ENST00000460547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
YIPF3-205ENST00000460547 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
YIPF3-205ENST00000460547 CARMIL3Q8ND23 1372 aa20.3■□□□□ 0.84
YIPF3-205ENST00000460547 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
YIPF3-205ENST00000460547 PIM2Q9P1W9 311 aa20.29■□□□□ 0.84
YIPF3-205ENST00000460547 NIP7Q9Y221 180 aaKnown RBP eCLIP20.29■□□□□ 0.84
YIPF3-205ENST00000460547 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
YIPF3-205ENST00000460547 NUP98P52948 1817 aa20.29■□□□□ 0.84
YIPF3-205ENST00000460547 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
YIPF3-205ENST00000460547 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
YIPF3-205ENST00000460547 ZNF34Q8IZ26 560 aa20.28■□□□□ 0.84
YIPF3-205ENST00000460547 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
YIPF3-205ENST00000460547 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
YIPF3-205ENST00000460547 AKAP2Q9Y2D5 859 aa20.28■□□□□ 0.84
YIPF3-205ENST00000460547 RPAP1Q9BWH6 1393 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-205ENST00000460547 TRAK2O60296 914 aa20.27■□□□□ 0.84
YIPF3-205ENST00000460547 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-205ENST00000460547 CHRNA5P30532 468 aa20.27■□□□□ 0.84
YIPF3-205ENST00000460547 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
YIPF3-205ENST00000460547 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
YIPF3-205ENST00000460547 NBPF5PQ86XG9 351 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-205ENST00000460547 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
YIPF3-205ENST00000460547 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
YIPF3-205ENST00000460547 UTRNP46939 3433 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 A0A1B0GUL7 405 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 KCNA3P22001 575 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 GPTP24298 496 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms