RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 GPSM2P81274 684 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC12-204ENST00000460035 MTX1Q13505 466 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 PSMD1Q99460 953 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 CHMP4BQ9H444 224 aaKnown RBP13.56□□□□□ -0.24
CCDC12-204ENST00000460035 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 CNNM1Q9NRU3 951 aa13.56□□□□□ -0.24
CCDC12-204ENST00000460035 C6orf229H3BNL8 230 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 LMNB1P20700 586 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 C9orf131Q5VYM1 1079 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
CCDC12-204ENST00000460035 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 MINPP1Q9UNW1 487 aa13.55□□□□□ -0.24
CCDC12-204ENST00000460035 SCN9AQ15858 1988 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 ARAP2Q8WZ64 1704 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
CCDC12-204ENST00000460035 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
CCDC12-204ENST00000460035 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
CCDC12-204ENST00000460035 UTRNP46939 3433 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 CHRNDQ07001 517 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-204ENST00000460035 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
CCDC12-204ENST00000460035 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
CCDC12-204ENST00000460035 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-204ENST00000460035 PPIP5K2O43314 1243 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 UFL1O94874 794 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
CCDC12-204ENST00000460035 KCNJ4P48050 445 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 PRELPP51888 382 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 LARGE2Q8N3Y3 721 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 SIL1Q9H173 461 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 VPS33BQ9H267 617 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 XDHP47989 1333 aa13.52□□□□□ -0.25
CCDC12-204ENST00000460035 COL4A5P29400 1685 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
CCDC12-204ENST00000460035 PNMA6EA0A0J9YXQ4 647 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 EYA2O00167 538 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 TAF5LO75529 589 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 YY1P25490 414 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
CCDC12-204ENST00000460035 AOC3Q16853 763 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
CCDC12-204ENST00000460035 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 EYA3Q99504 573 aa13.51□□□□□ -0.25
CCDC12-204ENST00000460035 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
CCDC12-204ENST00000460035 WTIPA6NIX2 430 aaPredicted RBP13.5□□□□□ -0.25
CCDC12-204ENST00000460035 G3V3G9 751 aa13.5□□□□□ -0.25
CCDC12-204ENST00000460035 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
CCDC12-204ENST00000460035 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
CCDC12-204ENST00000460035 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
CCDC12-204ENST00000460035 COPRSQ9NQ92 184 aa13.5□□□□□ -0.25
CCDC12-204ENST00000460035 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
CCDC12-204ENST00000460035 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 SCN4AP35499 1836 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 CIAO1O76071 339 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC12-204ENST00000460035 POLA2Q14181 598 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
CCDC12-204ENST00000460035 ZNF804BA4D1E1 1349 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 SNAP23O00161 211 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 KIAA2012Q0VF49 1180 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-204ENST00000460035 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
CCDC12-204ENST00000460035 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
CCDC12-204ENST00000460035 SURF6O75683 361 aaKnown RBP13.47□□□□□ -0.25
CCDC12-204ENST00000460035 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-204ENST00000460035 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-204ENST00000460035 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
CCDC12-204ENST00000460035 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
CCDC12-204ENST00000460035 HMMRO75330 724 aa13.46□□□□□ -0.25
CCDC12-204ENST00000460035 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-204ENST00000460035 IL15P40933 162 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-204ENST00000460035 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
CCDC12-204ENST00000460035 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.25
CCDC12-204ENST00000460035 C15orf52Q6ZUT6 534 aaKnown RBP13.46□□□□□ -0.25
CCDC12-204ENST00000460035 VGLL2Q8N8G2 317 aa13.46□□□□□ -0.25
CCDC12-204ENST00000460035 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-204ENST00000460035 DBNDD1Q9H9R9 158 aa13.46□□□□□ -0.25
CCDC12-204ENST00000460035 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
CCDC12-204ENST00000460035 PDE8BO95263 885 aa13.45□□□□□ -0.26
CCDC12-204ENST00000460035 AAMPQ13685 434 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms