RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
HDLBP-228ENST00000459788 ATP2B4P23634 1241 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-228ENST00000459788 MMP14P50281 582 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 ANKIB1Q9P2G1 1089 aa12.75□□□□□ -0.37
HDLBP-228ENST00000459788 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 H7C1D1 291 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 CSF1RP07333 972 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 CASP7P55210 303 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 HTRA3P83110 453 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
HDLBP-228ENST00000459788 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 A0A1B0GUL6 1792 aa12.74□□□□□ -0.37
HDLBP-228ENST00000459788 MED23Q9ULK4 1368 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 E9PSI1 815 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 ECE2O60344 883 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 ALDH1L1O75891 902 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 UFL1O94874 794 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-228ENST00000459788 LEMD3Q9Y2U8 911 aa12.73□□□□□ -0.37
HDLBP-228ENST00000459788 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-228ENST00000459788 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-228ENST00000459788 RAD17O75943 681 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 VIL1P09327 827 aaKnown RBP12.72□□□□□ -0.37
HDLBP-228ENST00000459788 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
HDLBP-228ENST00000459788 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-228ENST00000459788 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 GREM2Q9H772 168 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
HDLBP-228ENST00000459788 THSD7BQ9C0I4 1608 aa12.72□□□□□ -0.37
HDLBP-228ENST00000459788 G3V3G9 751 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 PSMD14O00487 310 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-228ENST00000459788 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 DBNDD1Q9H9R9 158 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
HDLBP-228ENST00000459788 PTPRCP08575 1304 aa12.7□□□□□ -0.38
HDLBP-228ENST00000459788 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
HDLBP-228ENST00000459788 CDC37L1Q7L3B6 337 aa12.7□□□□□ -0.38
HDLBP-228ENST00000459788 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-228ENST00000459788 MYO3BQ8WXR4 1341 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 GRM8O00222 908 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 ITGA6P23229 1130 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
HDLBP-228ENST00000459788 DEFB115Q30KQ5 88 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
HDLBP-228ENST00000459788 UTYO14607 1347 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 ECE1P42892 770 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-228ENST00000459788 SLFN5Q08AF3 891 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-228ENST00000459788 C15orf52Q6ZUT6 534 aaKnown RBP12.68□□□□□ -0.38
HDLBP-228ENST00000459788 CCDC85AQ96PX6 553 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-228ENST00000459788 SRCIN1Q9C0H9 1055 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 COA1Q9GZY4 146 aa12.68□□□□□ -0.38
HDLBP-228ENST00000459788 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-228ENST00000459788 FOXO4P98177 505 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
HDLBP-228ENST00000459788 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
HDLBP-228ENST00000459788 GMLQ99445 158 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-228ENST00000459788 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
HDLBP-228ENST00000459788 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
HDLBP-228ENST00000459788 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
HDLBP-228ENST00000459788 F6X3S4 739 aa12.66□□□□□ -0.38
HDLBP-228ENST00000459788 HSPA1AP0DMV8 641 aaKnown RBP12.66□□□□□ -0.38
HDLBP-228ENST00000459788 HSPA1BP0DMV9 641 aaKnown RBP12.66□□□□□ -0.38
HDLBP-228ENST00000459788 VEGFBP49765 207 aa12.66□□□□□ -0.38
HDLBP-228ENST00000459788 CST9Q5W186 159 aa12.66□□□□□ -0.38
HDLBP-228ENST00000459788 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
HDLBP-228ENST00000459788 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
HDLBP-228ENST00000459788 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
HDLBP-228ENST00000459788 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-228ENST00000459788 PITPNM2Q9BZ72 1349 aa12.65□□□□□ -0.38
HDLBP-228ENST00000459788 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-228ENST00000459788 MAP2K1Q02750 393 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-228ENST00000459788 CCDC57Q2TAC2 916 aa12.65□□□□□ -0.38
HDLBP-228ENST00000459788 DCPSQ96C86 337 aaKnown RBP12.65□□□□□ -0.38
HDLBP-228ENST00000459788 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms