RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 DESP17661 470 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 TFCP2Q12800 502 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 LIG1P18858 919 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 IP6K1Q92551 441 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 USP8P40818 1118 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 CBX1P83916 185 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 UBASH3AP57075 661 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 TRIM47Q96LD4 638 aa13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
SMARCAD1-204ENST00000457823 MACROD2A1Z1Q3 448 aa13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 GSTO1P78417 241 aa13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 CETN1Q12798 172 aa13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 SNW1Q13573 536 aaKnown RBP13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 SAMM50Q9Y512 469 aa13.46□□□□□ -0.26
SMARCAD1-204ENST00000457823 RNF113AO15541 343 aaKnown RBP13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 HSPA2P54652 639 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 GNG11P61952 73 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 TIMM10P62072 90 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 BICC1Q9H694 974 aaKnown RBP13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZSWIM4Q9H7M6 989 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 MIGA1Q8NAN2 632 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 TBX22Q9Y458 520 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 ST5P78524 1137 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 MAP9Q49MG5 647 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 USP26Q9BXU7 913 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 DNAJC25Q9H1X3 360 aa13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
SMARCAD1-204ENST00000457823 CPA1P15085 419 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 RRAGBQ5VZM2 374 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 GOLGA6L7A0A1B0GV03 622 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 BMP15O95972 392 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 GNAQP50148 359 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 CCDC113Q9H0I3 377 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 SPTLC2O15270 562 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 NOP2P46087 812 aaKnown RBP13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
SMARCAD1-204ENST00000457823 MYO1BO43795 1136 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 DHX37Q8IY37 1157 aaKnown RBP13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 SKILP12757 684 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 SYCP3Q8IZU3 236 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 TRIM75PA6NK02 468 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 NEBLO76041 1014 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 IL13P35225 146 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 TOM1O60784 492 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
SMARCAD1-204ENST00000457823 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 PICALMQ13492 652 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 STAT6P42226 847 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 HLTFQ14527 1009 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 AOPEPQ8N6M6 819 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 CHL1O00533 1208 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 RXRAP19793 462 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 CCDC150Q8NCX0 1101 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 TTC12Q9H892 705 aaPredicted RBP13.42□□□□□ -0.26
SMARCAD1-204ENST00000457823 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms