RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 CCT4P50991 539 aaKnown RBP12.71□□□□□ -0.37
RFX3-210ENST00000457373 FOXO4P98177 505 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 ANKRD18AQ8IVF6 992 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 MPNDQ8N594 471 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
RFX3-210ENST00000457373 CLUAP1Q96AJ1 413 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
RFX3-210ENST00000457373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
RFX3-210ENST00000457373 ITGA6P23229 1130 aa12.7□□□□□ -0.38
RFX3-210ENST00000457373 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
RFX3-210ENST00000457373 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
RFX3-210ENST00000457373 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
RFX3-210ENST00000457373 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
RFX3-210ENST00000457373 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
RFX3-210ENST00000457373 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
RFX3-210ENST00000457373 CDC5LQ99459 802 aaKnown RBP12.7□□□□□ -0.38
RFX3-210ENST00000457373 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
RFX3-210ENST00000457373 TIAM2Q8IVF5 1701 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 TRIM27P14373 513 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
RFX3-210ENST00000457373 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 PSMD1Q99460 953 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
RFX3-210ENST00000457373 UTYO14607 1347 aa12.68□□□□□ -0.38
RFX3-210ENST00000457373 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
RFX3-210ENST00000457373 GPSM2P81274 684 aa12.68□□□□□ -0.38
RFX3-210ENST00000457373 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
RFX3-210ENST00000457373 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
RFX3-210ENST00000457373 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
RFX3-210ENST00000457373 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 PPIP5K2O43314 1243 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
RFX3-210ENST00000457373 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
RFX3-210ENST00000457373 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
RFX3-210ENST00000457373 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 MPHOSPH8Q99549 860 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
RFX3-210ENST00000457373 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
RFX3-210ENST00000457373 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
RFX3-210ENST00000457373 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 AOC3Q16853 763 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 JDP2Q8WYK2 163 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
RFX3-210ENST00000457373 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
RFX3-210ENST00000457373 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
RFX3-210ENST00000457373 BSDC1Q9NW68 430 aaPredicted RBP12.66□□□□□ -0.38
RFX3-210ENST00000457373 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
RFX3-210ENST00000457373 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
RFX3-210ENST00000457373 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
RFX3-210ENST00000457373 MEIS3Q99687 375 aa12.65□□□□□ -0.38
RFX3-210ENST00000457373 POLLQ9UGP5 575 aa12.65□□□□□ -0.38
RFX3-210ENST00000457373 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
RFX3-210ENST00000457373 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
RFX3-210ENST00000457373 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 UFL1O94874 794 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 TBC1D16Q8TBP0 767 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 EYA3Q99504 573 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
RFX3-210ENST00000457373 GGA1Q9UJY5 639 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
RFX3-210ENST00000457373 XDHP47989 1333 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 PLIN1O60240 522 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 DDNO94850 711 aaPredicted RBP12.63□□□□□ -0.39
RFX3-210ENST00000457373 GNAI3P08754 354 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 ATP2B4P23634 1241 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
RFX3-210ENST00000457373 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
RFX3-210ENST00000457373 LDHAL6AQ6ZMR3 332 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 CNNM1Q9NRU3 951 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
RFX3-210ENST00000457373 COL4A5P29400 1685 aa12.63□□□□□ -0.39
RFX3-210ENST00000457373 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 WTIPA6NIX2 430 aaPredicted RBP12.62□□□□□ -0.39
RFX3-210ENST00000457373 G3V3G9 751 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 FZD9O00144 591 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 RLBP1P12271 317 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 CHRNDQ07001 517 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms