RNA–Protein interactions for RNA: ENST00000457029.3

FARP1-205, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-205ENST00000457029 RTL9Q8NET4 1388 aa10.79□□□□□ -0.68
FARP1-205ENST00000457029 RFX5P48382 616 aaPredicted RBP10.79□□□□□ -0.68
FARP1-205ENST00000457029 VEGFBP49765 207 aa10.79□□□□□ -0.68
FARP1-205ENST00000457029 PPP1R42Q7Z4L9 355 aa10.79□□□□□ -0.68
FARP1-205ENST00000457029 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
FARP1-205ENST00000457029 NLGN1Q8N2Q7 840 aa10.79□□□□□ -0.68
FARP1-205ENST00000457029 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
FARP1-205ENST00000457029 KCNA3P22001 575 aa10.78□□□□□ -0.68
FARP1-205ENST00000457029 MAP2K1Q02750 393 aaPredicted RBP10.78□□□□□ -0.68
FARP1-205ENST00000457029 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
FARP1-205ENST00000457029 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
FARP1-205ENST00000457029 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 GABBR2O75899 941 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 CSF1RP07333 972 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 LMNB1P20700 586 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 GPTP24298 496 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 SUSD4Q5VX71 490 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 USPL1Q5W0Q7 1092 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
FARP1-205ENST00000457029 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 COPRSQ9NQ92 184 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 CASP8AP2Q9UKL3 1982 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 SALL3Q9BXA9 1300 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 ABCC12Q96J65 1359 aa10.77□□□□□ -0.69
FARP1-205ENST00000457029 GYS1P13807 737 aa10.76□□□□□ -0.69
FARP1-205ENST00000457029 PDE4AP27815 886 aa10.76□□□□□ -0.69
FARP1-205ENST00000457029 TBC1D9BQ66K14 1250 aa10.76□□□□□ -0.69
FARP1-205ENST00000457029 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
FARP1-205ENST00000457029 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
FARP1-205ENST00000457029 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
FARP1-205ENST00000457029 SH3TC1Q8TE82 1336 aa10.76□□□□□ -0.69
FARP1-205ENST00000457029 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 CCDC88AQ3V6T2 1871 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 ZPR1O75312 459 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 RFC4P35249 363 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 CTSWP56202 376 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 PTPN12Q05209 780 aaKnown RBP10.75□□□□□ -0.69
FARP1-205ENST00000457029 SLC10A5Q5PT55 438 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 FAM89AQ96GI7 184 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 UTP14AQ9BVJ6 771 aaKnown RBP10.75□□□□□ -0.69
FARP1-205ENST00000457029 PARP3Q9Y6F1 533 aa10.75□□□□□ -0.69
FARP1-205ENST00000457029 COL4A1P02462 1669 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 TMEM88BA6NKF7 163 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 POTECB2RU33 542 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 IRS4O14654 1257 aaPredicted RBP10.74□□□□□ -0.69
FARP1-205ENST00000457029 PDE8AO60658 829 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 RASSF7Q02833 373 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 LMBR1LQ6UX01 489 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 SKAP1Q86WV1 359 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 JARID2Q92833 1246 aaPredicted RBP10.74□□□□□ -0.69
FARP1-205ENST00000457029 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
FARP1-205ENST00000457029 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
FARP1-205ENST00000457029 DLL1O00548 723 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 HSP90B1P14625 803 aaKnown RBP10.73□□□□□ -0.69
FARP1-205ENST00000457029 TM4SF1P30408 202 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 NFIXQ14938 502 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 SYNE4Q8N205 404 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 TTLL11Q8NHH1 800 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 MCOLN1Q9GZU1 580 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
FARP1-205ENST00000457029 ZBTB47Q9UFB7 747 aaPredicted RBP10.73□□□□□ -0.69
FARP1-205ENST00000457029 A0A1B0GUL6 1792 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 RASSF10A6NK89 507 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 CIAO1O76071 339 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 SF3B3Q15393 1217 aaKnown RBP10.72□□□□□ -0.69
FARP1-205ENST00000457029 ERC1Q8IUD2 1116 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 KIF1BPQ96EK5 621 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 LNPKQ9C0E8 428 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 PA2G4Q9UQ80 394 aaKnown RBP10.72□□□□□ -0.69
FARP1-205ENST00000457029 THSD7BQ9C0I4 1608 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
FARP1-205ENST00000457029 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
FARP1-205ENST00000457029 ZNF609O15014 1411 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 SURF6O75683 361 aaKnown RBP10.71□□□□□ -0.69
FARP1-205ENST00000457029 SASH1O94885 1247 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 AOX1Q06278 1338 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 DDR1Q08345 913 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 RHPN1Q8TCX5 695 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 SETDB2Q96T68 719 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
FARP1-205ENST00000457029 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 LTBP1Q14766 1721 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 NUBP1P53384 320 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 RTL5Q5HYW3 569 aaPredicted RBP10.7□□□□□ -0.7
FARP1-205ENST00000457029 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
FARP1-205ENST00000457029 GREM2Q9H772 168 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms