RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 CICQ96RK0 1608 aaPredicted RBP9.55□□□□□ -0.88
COMMD3-204ENST00000456711 GJA5P36382 358 aa9.54□□□□□ -0.88
COMMD3-204ENST00000456711 NGDNQ8NEJ9 315 aaKnown RBP9.54□□□□□ -0.88
COMMD3-204ENST00000456711 ABHD8Q96I13 439 aa9.54□□□□□ -0.88
COMMD3-204ENST00000456711 ZBTB3Q9H5J0 574 aa9.54□□□□□ -0.88
COMMD3-204ENST00000456711 ADGRF5Q8IZF2 1346 aa9.54□□□□□ -0.88
COMMD3-204ENST00000456711 NUTM2GQ5VZR2 741 aa9.53□□□□□ -0.88
COMMD3-204ENST00000456711 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
COMMD3-204ENST00000456711 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-204ENST00000456711 TFCP2L1Q9NZI6 479 aa9.53□□□□□ -0.88
COMMD3-204ENST00000456711 BTAF1O14981 1849 aa9.53□□□□□ -0.88
COMMD3-204ENST00000456711 COL8A1P27658 744 aa9.52□□□□□ -0.89
COMMD3-204ENST00000456711 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
COMMD3-204ENST00000456711 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
COMMD3-204ENST00000456711 PRR36Q9H6K5 1346 aa9.52□□□□□ -0.89
COMMD3-204ENST00000456711 FOXN1O15353 648 aa9.51□□□□□ -0.89
COMMD3-204ENST00000456711 SAFB2Q14151 953 aaKnown RBP eCLIP9.51□□□□□ -0.89
COMMD3-204ENST00000456711 FAM50AQ14320 339 aaKnown RBP9.51□□□□□ -0.89
COMMD3-204ENST00000456711 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
COMMD3-204ENST00000456711 TSC1Q92574 1164 aa9.51□□□□□ -0.89
COMMD3-204ENST00000456711 KCTD15Q96SI1 283 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-204ENST00000456711 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-204ENST00000456711 C10orf71Q711Q0 1435 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 DBN1Q16643 649 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 SLC27A3Q5K4L6 730 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 TOM1L2Q6ZVM7 507 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 ACSBG1Q96GR2 724 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 KRTAP9-9Q9BYP9 154 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 KRTAP9-4Q9BYQ2 154 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
COMMD3-204ENST00000456711 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
COMMD3-204ENST00000456711 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
COMMD3-204ENST00000456711 USP6P35125 1406 aa9.49□□□□□ -0.89
COMMD3-204ENST00000456711 EXOC5O00471 708 aa9.49□□□□□ -0.89
COMMD3-204ENST00000456711 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
COMMD3-204ENST00000456711 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-204ENST00000456711 KDF1Q8NAX2 398 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-204ENST00000456711 PRAM1Q96QH2 718 aa9.49□□□□□ -0.89
COMMD3-204ENST00000456711 RHOQP17081 205 aa9.48□□□□□ -0.89
COMMD3-204ENST00000456711 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-204ENST00000456711 INTS6LQ5JSJ4 861 aaKnown RBP9.48□□□□□ -0.89
COMMD3-204ENST00000456711 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
COMMD3-204ENST00000456711 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
COMMD3-204ENST00000456711 OIP5O43482 229 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 CTCFP49711 727 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-204ENST00000456711 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
COMMD3-204ENST00000456711 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 COL23A1Q86Y22 540 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-204ENST00000456711 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 PIK3C2AO00443 1686 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 PIK3C2GO75747 1445 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
COMMD3-204ENST00000456711 TNRC6CQ9HCJ0 1690 aaKnown RBP9.46□□□□□ -0.89
COMMD3-204ENST00000456711 CCDC85CA6NKD9 419 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 GCP02774 474 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
COMMD3-204ENST00000456711 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.9
COMMD3-204ENST00000456711 WDR17Q8IZU2 1322 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
COMMD3-204ENST00000456711 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
COMMD3-204ENST00000456711 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
COMMD3-204ENST00000456711 ABTB2Q8N961 1025 aa9.45□□□□□ -0.9
COMMD3-204ENST00000456711 RRAGCQ9HB90 399 aa9.45□□□□□ -0.9
COMMD3-204ENST00000456711 POGKQ9P215 609 aa9.45□□□□□ -0.9
COMMD3-204ENST00000456711 KCPQ6ZWJ8 1503 aa9.45□□□□□ -0.9
COMMD3-204ENST00000456711 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-204ENST00000456711 SHISA8B8ZZ34 492 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
COMMD3-204ENST00000456711 KCNQ4P56696 695 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 QPCTQ16769 361 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 RIC3Q7Z5B4 369 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 ABCC6O95255 1503 aa9.44□□□□□ -0.9
COMMD3-204ENST00000456711 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 WASLO00401 505 aaPredicted RBP9.43□□□□□ -0.9
COMMD3-204ENST00000456711 ADH1AP07327 375 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 LBX1P52954 281 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 RIPOR1Q6ZS17 1223 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
COMMD3-204ENST00000456711 COL18A1P39060 1754 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 PTGIRP43119 386 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 C1orf229Q6ZS94 237 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-204ENST00000456711 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 NLRP13Q86W25 1043 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
COMMD3-204ENST00000456711 LY75O60449 1722 aa9.42□□□□□ -0.9
COMMD3-204ENST00000456711 KAT6BQ8WYB5 2073 aa9.41□□□□□ -0.9
COMMD3-204ENST00000456711 LILRA1O75019 489 aa9.41□□□□□ -0.9
COMMD3-204ENST00000456711 C9orf131Q5VYM1 1079 aa9.41□□□□□ -0.9
COMMD3-204ENST00000456711 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
COMMD3-204ENST00000456711 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
COMMD3-204ENST00000456711 MKL2Q9ULH7 1088 aa9.41□□□□□ -0.9
COMMD3-204ENST00000456711 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-204ENST00000456711 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms