RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZNF157P51786 506 aaPredicted RBP18.58■□□□□ 0.56
LYSMD3-202ENST00000453259 GPSM2P81274 684 aa18.58■□□□□ 0.56
LYSMD3-202ENST00000453259 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.56
LYSMD3-202ENST00000453259 CFAP44Q96MT7 982 aa18.58■□□□□ 0.56
LYSMD3-202ENST00000453259 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
LYSMD3-202ENST00000453259 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
LYSMD3-202ENST00000453259 SLC10A3P09131 477 aa18.57■□□□□ 0.56
LYSMD3-202ENST00000453259 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
LYSMD3-202ENST00000453259 RUNDC1Q96C34 613 aa18.57■□□□□ 0.56
LYSMD3-202ENST00000453259 PITPNM2Q9BZ72 1349 aa18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 ZNF280AP59817 542 aaPredicted RBP18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 KIF23Q02241 960 aaPredicted RBP18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 GGA3Q9NZ52 723 aa18.56■□□□□ 0.56
LYSMD3-202ENST00000453259 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 ADM5C9JUS6 153 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 G3V3G9 751 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 EGFRP00533 1210 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 DCAF8Q5TAQ9 597 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
LYSMD3-202ENST00000453259 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 KRT24Q2M2I5 525 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 CCDC152Q4G0S7 254 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 RNF186Q9NXI6 227 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 PAPPA2Q9BXP8 1791 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 AKAP11Q9UKA4 1901 aa18.54■□□□□ 0.56
LYSMD3-202ENST00000453259 UFL1O94874 794 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 MMP14P50281 582 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 DOK7Q18PE1 504 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 RBM26Q5T8P6 1007 aaKnown RBP18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 RSBN1LQ6PCB5 846 aaPredicted RBP18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 CDCA5Q96FF9 252 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 LAS1LQ9Y4W2 734 aaKnown RBP18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 PSME4Q14997 1843 aa18.53■□□□□ 0.56
LYSMD3-202ENST00000453259 TRPA1O75762 1119 aa18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 PKN2Q16513 984 aaKnown RBP18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 RIC3Q7Z5B4 369 aa18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 PODNQ7Z5L7 613 aa18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 CTU1Q7Z7A3 348 aaKnown RBP18.52■□□□□ 0.56
LYSMD3-202ENST00000453259 SCN9AQ15858 1988 aa18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 XDHP47989 1333 aa18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 CSRNP1Q96S65 589 aa18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 KCNQ5Q9NR82 932 aa18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 POLR2AP24928 1970 aaKnown RBP18.51■□□□□ 0.55
LYSMD3-202ENST00000453259 PDE8AO60658 829 aa18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 USP17L8P0C7I0 530 aa18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 DLK2Q6UY11 383 aa18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 GMLQ99445 158 aa18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 COL4A1P02462 1669 aa18.5■□□□□ 0.55
LYSMD3-202ENST00000453259 DDX58O95786 925 aaKnown RBP18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 ATP2B4P23634 1241 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 SCARF1Q14162 830 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 RASAL3Q86YV0 1011 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 MYO3BQ8WXR4 1341 aa18.49■□□□□ 0.55
LYSMD3-202ENST00000453259 PDE4DIPQ5VU43 2346 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 USP17L3A6NCW0 530 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 USP17L4A6NCW7 530 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 TNRC18O15417 2968 aaPredicted RBP18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 USP17L1Q7RTZ2 530 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 CWC25Q9NXE8 425 aaPredicted RBP18.48■□□□□ 0.55
LYSMD3-202ENST00000453259 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
LYSMD3-202ENST00000453259 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
LYSMD3-202ENST00000453259 GNAI1P63096 354 aa18.47■□□□□ 0.55
LYSMD3-202ENST00000453259 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
LYSMD3-202ENST00000453259 OGFOD1Q8N543 542 aa18.46■□□□□ 0.55
LYSMD3-202ENST00000453259 NF2P35240 595 aa18.45■□□□□ 0.54
LYSMD3-202ENST00000453259 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
LYSMD3-202ENST00000453259 MYD88Q99836 296 aa18.45■□□□□ 0.54
LYSMD3-202ENST00000453259 METTL22Q9BUU2 404 aaPredicted RBP18.45■□□□□ 0.54
LYSMD3-202ENST00000453259 ASTN2O75129 1339 aaPredicted RBP18.45■□□□□ 0.54
LYSMD3-202ENST00000453259 PRPF38BQ5VTL8 546 aaKnown RBP18.44■□□□□ 0.54
LYSMD3-202ENST00000453259 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
LYSMD3-202ENST00000453259 CFHR5Q9BXR6 569 aa18.43■□□□□ 0.54
LYSMD3-202ENST00000453259 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
LYSMD3-202ENST00000453259 ADAMTS8Q9UP79 889 aa18.43■□□□□ 0.54
LYSMD3-202ENST00000453259 TM4SF4P48230 202 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 CTSWP56202 376 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 SOX10P56693 466 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 SREBF2Q12772 1141 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 STRIP1Q5VSL9 837 aa18.42■□□□□ 0.54
LYSMD3-202ENST00000453259 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 395.9 ms