RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■□□□□ 9.6
PKP4-206ENST00000452162 GCKRQ14397 625 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 RILPL2Q969X0 211 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
PKP4-206ENST00000452162 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
PKP4-206ENST00000452162 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
PKP4-206ENST00000452162 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 AK9Q5TCS8 1911 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
PKP4-206ENST00000452162 SRGNP10124 158 aa13.03□□□□□ -0.32
PKP4-206ENST00000452162 GPR162Q16538 588 aa13.03□□□□□ -0.32
PKP4-206ENST00000452162 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
PKP4-206ENST00000452162 ERC1Q8IUD2 1116 aa13.03□□□□□ -0.32
PKP4-206ENST00000452162 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
PKP4-206ENST00000452162 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
PKP4-206ENST00000452162 OS9Q13438 667 aaPredicted RBP13.02□□□□□ -0.32
PKP4-206ENST00000452162 GSE1Q14687 1217 aa13.02□□□□□ -0.32
PKP4-206ENST00000452162 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.32
PKP4-206ENST00000452162 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.322e-7■□□□□ 10
PKP4-206ENST00000452162 BCS1LQ9Y276 419 aa13.02□□□□□ -0.32
PKP4-206ENST00000452162 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.32
PKP4-206ENST00000452162 TAF1P21675 1872 aa13.02□□□□□ -0.32
PKP4-206ENST00000452162 SLX4Q8IY92 1834 aa13.02□□□□□ -0.33
PKP4-206ENST00000452162 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
PKP4-206ENST00000452162 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
PKP4-206ENST00000452162 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
PKP4-206ENST00000452162 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
PKP4-206ENST00000452162 MCM4P33991 863 aa13.01□□□□□ -0.33
PKP4-206ENST00000452162 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
PKP4-206ENST00000452162 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
PKP4-206ENST00000452162 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
PKP4-206ENST00000452162 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
PKP4-206ENST00000452162 MYH3P11055 1940 aa13□□□□□ -0.33
PKP4-206ENST00000452162 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
PKP4-206ENST00000452162 TTLL6Q8N841 843 aa13□□□□□ -0.33
PKP4-206ENST00000452162 IL17RAQ96F46 866 aa13□□□□□ -0.33
PKP4-206ENST00000452162 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
PKP4-206ENST00000452162 SASH1O94885 1247 aa13□□□□□ -0.33
PKP4-206ENST00000452162 NPR1P16066 1061 aa13□□□□□ -0.33
PKP4-206ENST00000452162 EPHA10Q5JZY3 1008 aa13□□□□□ -0.33
PKP4-206ENST00000452162 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
PKP4-206ENST00000452162 H7C1W4 665 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
PKP4-206ENST00000452162 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
PKP4-206ENST00000452162 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 IL25Q9H293 177 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 CASP7P55210 303 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
PKP4-206ENST00000452162 ST18O60284 1047 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 ANAPC15P60006 121 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 RABL6Q3YEC7 729 aaPredicted RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 MCCP23508 829 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.33
PKP4-206ENST00000452162 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
PKP4-206ENST00000452162 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
PKP4-206ENST00000452162 SGSM2O43147 1006 aa12.97□□□□□ -0.33
PKP4-206ENST00000452162 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
PKP4-206ENST00000452162 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
PKP4-206ENST00000452162 AACSQ86V21 672 aa12.97□□□□□ -0.33
PKP4-206ENST00000452162 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
PKP4-206ENST00000452162 CHD4Q14839 1912 aa12.97□□□□□ -0.33
PKP4-206ENST00000452162 PDE8AO60658 829 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.33
PKP4-206ENST00000452162 COL4A1P02462 1669 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
PKP4-206ENST00000452162 C21orf2O43822 256 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 RAD50Q92878 1312 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 HSPA4P34932 840 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 SIL1Q9H173 461 aa12.95□□□□□ -0.34
PKP4-206ENST00000452162 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
PKP4-206ENST00000452162 CTSWP56202 376 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
PKP4-206ENST00000452162 C7orf43Q8WVR3 580 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms