RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 CELF2O95319 508 aaKnown RBP10.13□□□□□ -0.79
HCG18-238ENST00000449544 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
HCG18-238ENST00000449544 LEMD3Q9Y2U8 911 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
HCG18-238ENST00000449544 PABPC4Q13310 644 aaKnown RBP eCLIP10.13□□□□□ -0.791e-8■■■■□ 22.8
HCG18-238ENST00000449544 UBAC1Q9BSL1 405 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 NLRP10Q86W26 655 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 ROBO1Q9Y6N7 1651 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 HLFQ16534 295 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
HCG18-238ENST00000449544 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
HCG18-238ENST00000449544 CNOT7Q9UIV1 285 aaKnown RBP10.13□□□□□ -0.79
HCG18-238ENST00000449544 COL5A2P05997 1499 aaPredicted RBP10.12□□□□□ -0.79
HCG18-238ENST00000449544 GLRX3O76003 335 aaKnown RBP10.12□□□□□ -0.79
HCG18-238ENST00000449544 PUM3Q15397 648 aaKnown RBP10.12□□□□□ -0.79
HCG18-238ENST00000449544 TTC6Q86TZ1 520 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 TSPYL6Q8N831 410 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 ZNF594Q96JF6 807 aaPredicted RBP10.12□□□□□ -0.79
HCG18-238ENST00000449544 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
HCG18-238ENST00000449544 RASSF7Q02833 373 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 UBR1Q8IWV7 1749 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 GCKRQ14397 625 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 PDE3AQ14432 1141 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 NBR1Q14596 966 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 GADL1Q6ZQY3 521 aa10.12□□□□□ -0.79
HCG18-238ENST00000449544 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
HCG18-238ENST00000449544 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
HCG18-238ENST00000449544 EPHX2P34913 555 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
HCG18-238ENST00000449544 STYK1Q6J9G0 422 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 HIP1O00291 1037 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
HCG18-238ENST00000449544 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 PRKAG2Q9UGJ0 569 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 GOLIM4O00461 696 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 LRRC4BQ9NT99 713 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 KIF3AQ9Y496 699 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 RGS12O14924 1447 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 RNF123Q5XPI4 1314 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 ZBED9Q6R2W3 1325 aa10.11□□□□□ -0.79
HCG18-238ENST00000449544 ANP32AP39687 249 aaKnown RBP10.1□□□□□ -0.79
HCG18-238ENST00000449544 MAP1SQ66K74 1059 aaPredicted RBP10.1□□□□□ -0.79
HCG18-238ENST00000449544 MICALL2Q8IY33 904 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 TMEM57Q8N5G2 664 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 SEC31BQ9NQW1 1179 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 USP40Q9NVE5 1235 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 DEPDC5O75140 1603 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 CNGA1P29973 690 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 SH2D4AQ9H788 454 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 TNS2Q63HR2 1409 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 EYA2O00167 538 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
HCG18-238ENST00000449544 TRIM29Q14134 588 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 ZYXQ15942 572 aaKnown RBP10.1□□□□□ -0.79
HCG18-238ENST00000449544 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 MAP4K4O95819 1239 aaPredicted RBP10.1□□□□□ -0.79
HCG18-238ENST00000449544 PDE4BQ07343 736 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 NLGN2Q8NFZ4 835 aa10.1□□□□□ -0.79
HCG18-238ENST00000449544 NPC1L1Q9UHC9 1359 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 LAMC1P11047 1609 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 ECE2O60344 883 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 PAGR1Q9BTK6 254 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 BCAMP50895 628 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 CHRNDQ07001 517 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
HCG18-238ENST00000449544 G2E3Q7L622 706 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 NUP133Q8WUM0 1156 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 MCM9Q9NXL9 1143 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 ATRNO75882 1429 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 GOLGA6L4A6NEF3 574 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 B4DLN1 442 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 GYG1P46976 350 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
HCG18-238ENST00000449544 PROSER3Q2NL68 480 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 CCDC184Q52MB2 194 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
HCG18-238ENST00000449544 CTNNA3Q9UI47 895 aa10.09□□□□□ -0.79
HCG18-238ENST00000449544 MROH5Q6ZUA9 1318 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 PNPLA7Q6ZV29 1317 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 LPIN2Q92539 896 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 GPR101Q96P66 508 aaPredicted RBP10.08□□□□□ -0.8
HCG18-238ENST00000449544 COA1Q9GZY4 146 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 GREM2Q9H772 168 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 AS3MTQ9HBK9 375 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 SLC5A4Q9NY91 659 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 NOD1Q9Y239 953 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 DISP2A7MBM2 1401 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 ONECUT3O60422 494 aaPredicted RBP10.08□□□□□ -0.8
HCG18-238ENST00000449544 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
HCG18-238ENST00000449544 GMPSP49915 693 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms