RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
AP000253.1-201ENST00000449339 CNTNAP4Q9C0A0 1308 aa19.34■□□□□ 0.69
AP000253.1-201ENST00000449339 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 PARP10Q53GL7 1025 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 METTL24Q5JXM2 366 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 MAP4K1Q92918 833 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 KCNB2Q92953 911 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 XAGE2Q96GT9 111 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 CNNM1Q9NRU3 951 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 CCNL1Q9UK58 526 aaPredicted RBP19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.69
AP000253.1-201ENST00000449339 GOLIM4O00461 696 aa19.33■□□□□ 0.68
AP000253.1-201ENST00000449339 CASTP20810 708 aaKnown RBP19.33■□□□□ 0.68
AP000253.1-201ENST00000449339 ZNF589Q86UQ0 364 aaPredicted RBP19.33■□□□□ 0.68
AP000253.1-201ENST00000449339 RBM8AQ9Y5S9 174 aaKnown RBP19.33■□□□□ 0.68
AP000253.1-201ENST00000449339 MED23Q9ULK4 1368 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 KCNJ4P48050 445 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 AK2P54819 239 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 SLFNL1Q499Z3 407 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 AMIGO3Q86WK7 504 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 SEC31BQ9NQW1 1179 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 PAG1Q9NWQ8 432 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 AKAP2Q9Y2D5 859 aa19.32■□□□□ 0.68
AP000253.1-201ENST00000449339 IFIT1P09914 478 aaKnown RBP19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 ADCK5Q3MIX3 580 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 BICDL1Q6ZP65 573 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 JAKMIP1Q96N16 626 aaKnown RBP19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 SRP68Q9UHB9 627 aaKnown RBP19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 ZNF652Q9Y2D9 606 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 GNPATO15228 680 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 GORABQ5T7V8 394 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 SEC62Q99442 399 aaKnown RBP19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
AP000253.1-201ENST00000449339 ATP2B3Q16720 1220 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 CREB3L3Q68CJ9 461 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 CCDC129Q6ZRS4 1044 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 BCL2L12Q9HB09 334 aa19.3■□□□□ 0.68
AP000253.1-201ENST00000449339 CPA1P15085 419 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 USPL1Q5W0Q7 1092 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 VGLL2Q8N8G2 317 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 HELBQ8NG08 1087 aaPredicted RBP19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 AK7Q96M32 723 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 ZSWIM6Q9HCJ5 1215 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 RFX7Q2KHR2 1363 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 LY75O60449 1722 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 SCARF1Q14162 830 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 RC3H1Q5TC82 1133 aaKnown RBP19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 RUFY3Q7L099 469 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 TAF1LQ8IZX4 1826 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 EP400Q96L91 3159 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 SPEF2Q9C093 1822 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 LIMCH1Q9UPQ0 1083 aa19.29■□□□□ 0.68
AP000253.1-201ENST00000449339 RPS6KA4O75676 772 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 VPS53Q5VIR6 699 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 CYP46A1Q9Y6A2 500 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 SLC27A2O14975 620 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 FKBP4Q02790 459 aaKnown RBP eCLIP19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 CCDC158Q5M9N0 1113 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 LAMB2P55268 1798 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 SCN7AQ01118 1682 aa19.28■□□□□ 0.68
AP000253.1-201ENST00000449339 LRP5O75197 1615 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 TAF5LO75529 589 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 BRD1O95696 1058 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 PDRG1Q9NUG6 133 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 COL4A1P02462 1669 aa19.27■□□□□ 0.68
AP000253.1-201ENST00000449339 FSD2A1L4K1 749 aa19.27■□□□□ 0.67
AP000253.1-201ENST00000449339 PI16Q6UXB8 463 aa19.27■□□□□ 0.67
AP000253.1-201ENST00000449339 C3orf67Q6ZVT6 689 aa19.27■□□□□ 0.67
AP000253.1-201ENST00000449339 LARP6Q9BRS8 491 aaKnown RBP19.27■□□□□ 0.67
AP000253.1-201ENST00000449339 SNAP23O00161 211 aa19.26■□□□□ 0.67
AP000253.1-201ENST00000449339 PDE8BO95263 885 aa19.26■□□□□ 0.67
AP000253.1-201ENST00000449339 NARFQ9UHQ1 456 aa19.26■□□□□ 0.67
AP000253.1-201ENST00000449339 BRWD3Q6RI45 1802 aa19.26■□□□□ 0.67
AP000253.1-201ENST00000449339 KLHL40Q2TBA0 621 aa19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 CCDC152Q4G0S7 254 aa19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 FOXD4L5Q5VV16 416 aaPredicted RBP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 FOXD4L4Q8WXT5 416 aaPredicted RBP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 TAF6LQ9Y6J9 622 aa19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 RPAP1Q9BWH6 1393 aaPredicted RBP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 PSMA5P28066 241 aa19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 TAF1P21675 1872 aa19.25■□□□□ 0.67
AP000253.1-201ENST00000449339 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 PHF14O94880 888 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 ZAP70P43403 619 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 MCMDC2Q4G0Z9 681 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms