RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
BRPF3-206ENST00000449261 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 ZBTB43O43298 467 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 23.9
BRPF3-206ENST00000449261 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 RRAGDQ9NQL2 400 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 PTPRTO14522 1441 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 CTAGE5O15320 804 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 HOXB7P09629 217 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 DDX19AQ9NUU7 478 aaKnown RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 TFCP2Q12800 502 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 ZSCAN30Q86W11 494 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
BRPF3-206ENST00000449261 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
BRPF3-206ENST00000449261 MYO1BO43795 1136 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
BRPF3-206ENST00000449261 GNPATO15228 680 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 PAF1Q8N7H5 531 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
BRPF3-206ENST00000449261 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
BRPF3-206ENST00000449261 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
BRPF3-206ENST00000449261 PANK2Q9BZ23 570 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
BRPF3-206ENST00000449261 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 UBA7P41226 1012 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
BRPF3-206ENST00000449261 TERF1P54274 439 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
BRPF3-206ENST00000449261 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 ARHGEF10O15013 1369 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 RNF113AO15541 343 aaKnown RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 A1BGP04217 495 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 IDEP14735 1019 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 RTN1Q16799 776 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 TSG101Q99816 390 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-206ENST00000449261 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
BRPF3-206ENST00000449261 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 BIN1O00499 593 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 Q6ZUG5 572 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-206ENST00000449261 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
BRPF3-206ENST00000449261 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
BRPF3-206ENST00000449261 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 PICALMQ13492 652 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
BRPF3-206ENST00000449261 EYA2O00167 538 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 TIMM10P62072 90 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 PARP10Q53GL7 1025 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 ANKRD2Q9GZV1 360 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 PRC1O43663 620 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 GNAQP50148 359 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 KIAA1328Q86T90 577 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 SCLT1Q96NL6 688 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 HCLS1P14317 486 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 UBE2HP62256 183 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
BRPF3-206ENST00000449261 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
BRPF3-206ENST00000449261 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms