RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GREM2Q9H772 168 aa17.66■□□□□ 0.42
SF1-211ENST00000448404 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
SF1-211ENST00000448404 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
SF1-211ENST00000448404 Q6ZUG5 572 aa17.66■□□□□ 0.42
SF1-211ENST00000448404 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
SF1-211ENST00000448404 M0R2C6 588 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 HIP1O00291 1037 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 BRF1Q92994 677 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 ISCA1Q9BUE6 129 aa17.65■□□□□ 0.42
SF1-211ENST00000448404 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 NCOA5Q9HCD5 579 aaKnown RBP17.64■□□□□ 0.41
SF1-211ENST00000448404 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
SF1-211ENST00000448404 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.41
SF1-211ENST00000448404 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
SF1-211ENST00000448404 OSBP2Q969R2 916 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 XAGE2Q96GT9 111 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 NEK1Q96PY6 1258 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 CEP126Q9P2H0 1117 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
SF1-211ENST00000448404 FGD1P98174 961 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 ESPNB1AK53 854 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 ZAP70P43403 619 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 GIMAP6Q6P9H5 292 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 MAST3O60307 1309 aa17.63■□□□□ 0.41
SF1-211ENST00000448404 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
SF1-211ENST00000448404 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
SF1-211ENST00000448404 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
SF1-211ENST00000448404 KDM4AO75164 1064 aa17.62■□□□□ 0.41
SF1-211ENST00000448404 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
SF1-211ENST00000448404 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
SF1-211ENST00000448404 PSMA5P28066 241 aa17.62■□□□□ 0.41
SF1-211ENST00000448404 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
SF1-211ENST00000448404 ITGA6P23229 1130 aa17.61■□□□□ 0.41
SF1-211ENST00000448404 GUCY1B3Q02153 619 aa17.61■□□□□ 0.41
SF1-211ENST00000448404 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■■□ 23.1
SF1-211ENST00000448404 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
SF1-211ENST00000448404 HSPD1P10809 573 aaKnown RBP17.61■□□□□ 0.41
SF1-211ENST00000448404 CYP19A1P11511 503 aaPredicted RBP17.61■□□□□ 0.41
SF1-211ENST00000448404 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
SF1-211ENST00000448404 CAMK4Q16566 473 aa17.61■□□□□ 0.41
SF1-211ENST00000448404 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
SF1-211ENST00000448404 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 STARD3NLO95772 234 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 MBD3O95983 291 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 TTC39AQ5SRH9 613 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 TJP1Q07157 1748 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 METTL24Q5JXM2 366 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
SF1-211ENST00000448404 PUS7LQ9H0K6 701 aaKnown RBP17.6■□□□□ 0.41
SF1-211ENST00000448404 SH2B1Q9NRF2 756 aaPredicted RBP17.6■□□□□ 0.41
SF1-211ENST00000448404 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
SF1-211ENST00000448404 EXOC5O00471 708 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 CLCN1P35523 988 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
SF1-211ENST00000448404 UBN2Q6ZU65 1347 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 EP400Q96L91 3159 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
SF1-211ENST00000448404 FOXP2O15409 715 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 SCRN1Q12765 414 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 TTLL11Q8NHH1 800 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
SF1-211ENST00000448404 MAP3K15Q6ZN16 1313 aa17.59■□□□□ 0.41
SF1-211ENST00000448404 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.41
SF1-211ENST00000448404 PIP4K2BP78356 416 aa17.58■□□□□ 0.41
SF1-211ENST00000448404 PLCB2Q00722 1185 aa17.58■□□□□ 0.41
SF1-211ENST00000448404 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.41
SF1-211ENST00000448404 KCNQ2O43526 872 aa17.58■□□□□ 0.4
SF1-211ENST00000448404 ZMYM1Q5SVZ6 1142 aa17.58■□□□□ 0.4
SF1-211ENST00000448404 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
SF1-211ENST00000448404 CNNM1Q9NRU3 951 aa17.58■□□□□ 0.4
SF1-211ENST00000448404 RRP9O43818 475 aaKnown RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 LIG1P18858 919 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 INCENPQ9NQS7 918 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 GJB4Q9NTQ9 266 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 MCAMP43121 646 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 CCDC173Q0VFZ6 552 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 OTUD7BQ6GQQ9 843 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
SF1-211ENST00000448404 U3KPZ7 1027 aaPredicted RBP17.57■□□□□ 0.4
SF1-211ENST00000448404 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 E7EWF7 191 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 JCADQ9P266 1359 aa17.56■□□□□ 0.4
SF1-211ENST00000448404 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms