RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 EFCC1Q9HA90 598 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 ARGLU1Q9NWB6 273 aaPredicted RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 CTNNA3Q9UI47 895 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 NFAT5O94916 1531 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 NRKQ7Z2Y5 1582 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 PLSCR1O15162 318 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 CAVIN2O95810 425 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 TERF2Q15554 542 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 SMIM5Q71RC9 77 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 CNBD1Q8NA66 436 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 NLRP3Q96P20 1036 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 NCAPD2Q15021 1401 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 PRAMEF22A3QJZ6 481 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 IL6STP40189 918 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 RPAP2Q8IXW5 612 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 JARID2Q92833 1246 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 TMX3Q96JJ7 454 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 MPHOSPH8Q99549 860 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 NYXQ9GZU5 481 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 SRP68Q9UHB9 627 aaKnown RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 TUBB4AP04350 444 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 TNNT1P13805 278 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 CUL4AQ13619 759 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 TPD52L1Q16890 204 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 NOM1Q5C9Z4 860 aaKnown RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 TXLNBQ8N3L3 684 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 CWC25Q9NXE8 425 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 RGS12O14924 1447 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 SOCS7O14512 581 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 ZBTB7BO15156 539 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 MMP10P09238 476 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 HOXB7P09629 217 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 IRX5P78411 483 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
LMO3-209ENST00000447609 ZGPATQ8N5A5 531 aaKnown RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 ZNF830Q96NB3 372 aaPredicted RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 UTP14AQ9BVJ6 771 aaKnown RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 PHAXQ9H814 394 aaKnown RBP6.43□□□□□ -1.38
LMO3-209ENST00000447609 GNAI3P08754 354 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 HCLS1P14317 486 aaPredicted RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 CCT4P50991 539 aaKnown RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 NCBP1Q09161 790 aaKnown RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 CCDC57Q2TAC2 916 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 FOXD4L5Q5VV16 416 aaPredicted RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 TTLL7Q6ZT98 887 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 DDX46Q7L014 1031 aaKnown RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 KIF18AQ8NI77 898 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 FOXD4L4Q8WXT5 416 aaPredicted RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 TSC1Q92574 1164 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 ERO1AQ96HE7 468 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 NOL10Q9BSC4 688 aaKnown RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 CNNM1Q9NRU3 951 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 SLFN14P0C7P3 912 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 ITPK1Q13572 414 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 KSR2Q6VAB6 950 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 UBE3BQ7Z3V4 1068 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 ARHGEF1Q92888 912 aaKnown RBP6.42□□□□□ -1.38
LMO3-209ENST00000447609 DCTPP1Q9H773 170 aa6.42□□□□□ -1.38
LMO3-209ENST00000447609 VAMP4O75379 141 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 IGHMBP2P38935 993 aaKnown RBP6.41□□□□□ -1.38
LMO3-209ENST00000447609 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 LINC00116Q8NCU8 138 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 FAM200AQ8TCP9 573 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 BCS1LQ9Y276 419 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 ZDHHC9Q9Y397 364 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 ALS2Q96Q42 1657 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 GOLGA6L4A6NEF3 574 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 H0YIN7 160 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 TPM1P09493 284 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 CYP19A1P11511 503 aaPredicted RBP6.41□□□□□ -1.38
LMO3-209ENST00000447609 G3BP1Q13283 466 aaKnown RBP eCLIP6.41□□□□□ -1.38
LMO3-209ENST00000447609 PKP1Q13835 747 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 PARP10Q53GL7 1025 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 LTN1O94822 1766 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 SERPINB2P05120 415 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 PLBD2Q8NHP8 589 aa6.41□□□□□ -1.38
LMO3-209ENST00000447609 V9GYY5 206 aaPredicted RBP6.41□□□□□ -1.38
LMO3-209ENST00000447609 TRPM3Q9HCF6 1732 aaPredicted RBP6.41□□□□□ -1.38
LMO3-209ENST00000447609 PHRF1Q9P1Y6 1649 aaKnown RBP6.41□□□□□ -1.38
LMO3-209ENST00000447609 CCP110O43303 1012 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 NUTM1Q86Y26 1132 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 SLC16A10Q8TF71 515 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 YY1AP1Q9H869 796 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 ABCC4O15439 1325 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 SOS1Q07889 1333 aaPredicted RBP6.4□□□□□ -1.38
LMO3-209ENST00000447609 SH3TC1Q8TE82 1336 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 VGLL3A8MV65 326 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 C6orf229H3BNL8 230 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 PTPN14Q15678 1187 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 MAP3K11Q16584 847 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 RC3H1Q5TC82 1133 aaKnown RBP6.4□□□□□ -1.38
LMO3-209ENST00000447609 G2E3Q7L622 706 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 FAM89AQ96GI7 184 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 NARFQ9UHQ1 456 aa6.4□□□□□ -1.38
LMO3-209ENST00000447609 GSPT1P15170 499 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms