RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 MLH3Q9UHC1 1453 aa9.25□□□□□ -0.93
VPS8-210ENST00000446204 EPS15P42566 896 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 CCDC144CPQ8IYA2 1237 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 SMAP1Q8IYB5 467 aaPredicted RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 ALG1Q9BT22 464 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 GTPBP4Q9BZE4 634 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 MINDY4BA8MYZ0 360 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 HSP90AB3PQ58FF7 597 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 CCDC102AQ96A19 550 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 FEZ1Q99689 392 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 RNF41Q9H4P4 317 aaPredicted RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 CALCOCO1Q9P1Z2 691 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 DTNBO60941 627 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 ZNF75DP51815 510 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 GNG11P61952 73 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 ME3Q16798 604 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 IL17REQ8NFR9 667 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 DNAI1Q9UI46 699 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 POLR3GO15318 223 aaPredicted RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 RNF113AO15541 343 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 PRC1O43663 620 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 KANK3Q6NY19 840 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 LLPHQ9BRT6 129 aaKnown RBP9.24□□□□□ -0.93
VPS8-210ENST00000446204 DEF6Q9H4E7 631 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
VPS8-210ENST00000446204 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 JAKMIP3Q5VZ66 844 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 UNC5CLQ8IV45 518 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 CCDC148Q8NFR7 591 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 CPLX3Q8WVH0 158 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 SLC26A6Q9BXS9 759 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 CDC42BPBQ9Y5S2 1711 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 GCP02774 474 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 CDR1P51861 262 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 ZNF397Q8NF99 534 aaPredicted RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 SUCLG2Q96I99 432 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 ZBTB43O43298 467 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 SLC5A1P13866 664 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 EIF5P55010 431 aaKnown RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 PTH1RQ03431 593 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 KIAA1328Q86T90 577 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS8-210ENST00000446204 V9GYY5 206 aaPredicted RBP9.23□□□□□ -0.93
VPS8-210ENST00000446204 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 BRAPQ7Z569 592 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 TMX1Q9H3N1 280 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 HELLSQ9NRZ9 838 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 IFNKQ9P0W0 207 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 FPGT-TNNI3KV9GXZ4 949 aa9.23□□□□□ -0.93
VPS8-210ENST00000446204 KCNA6P17658 529 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 PDE4CQ08493 712 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CCDC181Q5TID7 509 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 OGFRQ9NZT2 677 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 GPTP24298 496 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 TXLNBQ8N3L3 684 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 LSG1Q9H089 658 aaKnown RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 LUC7LQ9NQ29 371 aaKnown RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 IQCA1Q86XH1 822 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 ARAP3Q8WWN8 1544 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CPSF1Q10570 1443 aaKnown RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 ATP2B3Q16720 1220 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 MFSD6Q6ZSS7 791 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
VPS8-210ENST00000446204 CTCFLQ8NI51 663 aaPredicted RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 SRRTQ9BXP5 876 aaKnown RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 TEX13AQ9BXU3 409 aaPredicted RBP9.22□□□□□ -0.93
VPS8-210ENST00000446204 A0A1B0GVL5 298 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 SOGA3Q5TF21 947 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 KIF2CQ99661 725 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
VPS8-210ENST00000446204 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
VPS8-210ENST00000446204 POTEB2H3BUK9 544 aa9.21□□□□□ -0.94
VPS8-210ENST00000446204 UQCRFS1P1P0C7P4 283 aa9.21□□□□□ -0.94
VPS8-210ENST00000446204 CHRNA2Q15822 529 aa9.21□□□□□ -0.94
VPS8-210ENST00000446204 CCDC12Q8WUD4 166 aaPredicted RBP9.21□□□□□ -0.94
VPS8-210ENST00000446204 NUP88Q99567 741 aaPredicted RBP9.21□□□□□ -0.94
VPS8-210ENST00000446204 RNF17Q9BXT8 1623 aaKnown RBP9.21□□□□□ -0.94
VPS8-210ENST00000446204 H0YHG0 523 aa9.21□□□□□ -0.94
VPS8-210ENST00000446204 RANBP6O60518 1105 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms