RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CNTROBQ8N137 903 aa25.53■■□□□ 1.68
LRCH3-208ENST00000443727 YDJCA8MPS7 323 aa25.52■■□□□ 1.68
LRCH3-208ENST00000443727 CREBZFQ9NS37 354 aa25.52■■□□□ 1.68
LRCH3-208ENST00000443727 ADARB2Q9NS39 739 aaKnown RBP25.52■■□□□ 1.68
LRCH3-208ENST00000443727 ECE2O60344 883 aa25.51■■□□□ 1.67
LRCH3-208ENST00000443727 PLA2G12BQ9BX93 195 aa25.51■■□□□ 1.67
LRCH3-208ENST00000443727 XDHP47989 1333 aa25.51■■□□□ 1.67
LRCH3-208ENST00000443727 ITGBL1O95965 494 aaPredicted RBP25.5■■□□□ 1.67
LRCH3-208ENST00000443727 IGHMBP2P38935 993 aaKnown RBP25.5■■□□□ 1.67
LRCH3-208ENST00000443727 BEND3Q5T5X7 828 aa25.5■■□□□ 1.67
LRCH3-208ENST00000443727 SLC4A10Q6U841 1118 aa25.5■■□□□ 1.67
LRCH3-208ENST00000443727 RTL9Q8NET4 1388 aa25.5■■□□□ 1.67
LRCH3-208ENST00000443727 PASKQ96RG2 1323 aa25.5■■□□□ 1.67
LRCH3-208ENST00000443727 BSDC1Q9NW68 430 aaPredicted RBP25.5■■□□□ 1.67
LRCH3-208ENST00000443727 LTBP1Q14766 1721 aa25.49■■□□□ 1.67
LRCH3-208ENST00000443727 CASP7P55210 303 aa25.49■■□□□ 1.67
LRCH3-208ENST00000443727 PSMD14O00487 310 aa25.48■■□□□ 1.67
LRCH3-208ENST00000443727 ITGA6P23229 1130 aa25.48■■□□□ 1.67
LRCH3-208ENST00000443727 ATP2B4P23634 1241 aa25.48■■□□□ 1.67
LRCH3-208ENST00000443727 TMEM88BA6NKF7 163 aa25.47■■□□□ 1.67
LRCH3-208ENST00000443727 H7C1D1 291 aa25.47■■□□□ 1.67
LRCH3-208ENST00000443727 SLFN5Q08AF3 891 aa25.47■■□□□ 1.67
LRCH3-208ENST00000443727 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
LRCH3-208ENST00000443727 CNOT7Q9UIV1 285 aaKnown RBP25.47■■□□□ 1.67
LRCH3-208ENST00000443727 MINPP1Q9UNW1 487 aa25.47■■□□□ 1.67
LRCH3-208ENST00000443727 ADAMTSL1Q8N6G6 1762 aa25.46■■□□□ 1.67
LRCH3-208ENST00000443727 MYH3P11055 1940 aa25.46■■□□□ 1.67
LRCH3-208ENST00000443727 JMYQ8N9B5 988 aa25.46■■□□□ 1.67
LRCH3-208ENST00000443727 MPHOSPH8Q99549 860 aa25.46■■□□□ 1.67
LRCH3-208ENST00000443727 C9orf78Q9NZ63 289 aaPredicted RBP25.46■■□□□ 1.67
LRCH3-208ENST00000443727 ZBTB12Q9Y330 459 aaPredicted RBP25.46■■□□□ 1.67
LRCH3-208ENST00000443727 CHMP3Q9Y3E7 222 aa25.46■■□□□ 1.67
LRCH3-208ENST00000443727 CSF1RP07333 972 aa25.45■■□□□ 1.66
LRCH3-208ENST00000443727 MICALL2Q8IY33 904 aa25.45■■□□□ 1.66
LRCH3-208ENST00000443727 SRCIN1Q9C0H9 1055 aa25.45■■□□□ 1.66
LRCH3-208ENST00000443727 KCNQ5Q9NR82 932 aa25.45■■□□□ 1.66
LRCH3-208ENST00000443727 MKRN1Q9UHC7 482 aaKnown RBP25.45■■□□□ 1.66
LRCH3-208ENST00000443727 GRM8O00222 908 aa25.44■■□□□ 1.66
LRCH3-208ENST00000443727 ANKRD18BA2A2Z9 1011 aa25.43■■□□□ 1.66
LRCH3-208ENST00000443727 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
LRCH3-208ENST00000443727 RPS12P25398 132 aaKnown RBP25.43■■□□□ 1.66
LRCH3-208ENST00000443727 MRPL50Q8N5N7 158 aaKnown RBP25.43■■□□□ 1.66
LRCH3-208ENST00000443727 DPF2Q92785 391 aa25.43■■□□□ 1.66
LRCH3-208ENST00000443727 CDCA7LQ96GN5 454 aa25.43■■□□□ 1.66
LRCH3-208ENST00000443727 ANKRD2Q9GZV1 360 aa25.42■■□□□ 1.66
LRCH3-208ENST00000443727 SHTN1A0MZ66 631 aa25.41■■□□□ 1.66
LRCH3-208ENST00000443727 CCT4P50991 539 aaKnown RBP25.41■■□□□ 1.66
LRCH3-208ENST00000443727 FOXO4P98177 505 aa25.41■■□□□ 1.66
LRCH3-208ENST00000443727 IFIT5Q13325 482 aaKnown RBP25.41■■□□□ 1.66
LRCH3-208ENST00000443727 TRPM4Q8TD43 1214 aa25.4■■□□□ 1.66
LRCH3-208ENST00000443727 SSH1Q8WYL5 1049 aa25.4■■□□□ 1.66
LRCH3-208ENST00000443727 PTPRCP08575 1304 aa25.39■■□□□ 1.66
LRCH3-208ENST00000443727 WTIPA6NIX2 430 aaPredicted RBP25.39■■□□□ 1.66
LRCH3-208ENST00000443727 KCNJ4P48050 445 aa25.39■■□□□ 1.66
LRCH3-208ENST00000443727 LMBR1LQ6UX01 489 aa25.39■■□□□ 1.66
LRCH3-208ENST00000443727 ZC3H15Q8WU90 426 aaKnown RBP25.39■■□□□ 1.66
LRCH3-208ENST00000443727 ABT1Q9ULW3 272 aaKnown RBP25.39■■□□□ 1.66
LRCH3-208ENST00000443727 LEMD3Q9Y2U8 911 aa25.39■■□□□ 1.66
LRCH3-208ENST00000443727 SPEF2Q9C093 1822 aa25.39■■□□□ 1.65
LRCH3-208ENST00000443727 TRAF5O00463 557 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 VIL1P09327 827 aaKnown RBP25.38■■□□□ 1.65
LRCH3-208ENST00000443727 HIRAP54198 1017 aaPredicted RBP25.38■■□□□ 1.65
LRCH3-208ENST00000443727 CCDC57Q2TAC2 916 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 TAF7LQ5H9L4 462 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 RBM26Q5T8P6 1007 aaKnown RBP25.38■■□□□ 1.65
LRCH3-208ENST00000443727 SAMD7Q7Z3H4 446 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 PODNQ7Z5L7 613 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 MED23Q9ULK4 1368 aa25.38■■□□□ 1.65
LRCH3-208ENST00000443727 CNTNAP1P78357 1384 aa25.37■■□□□ 1.65
LRCH3-208ENST00000443727 TBC1D10BQ4KMP7 808 aaPredicted RBP25.37■■□□□ 1.65
LRCH3-208ENST00000443727 ZNF804BA4D1E1 1349 aa25.37■■□□□ 1.65
LRCH3-208ENST00000443727 FMR1Q06787 632 aaKnown RBP eCLIP25.36■■□□□ 1.65
LRCH3-208ENST00000443727 EPHA10Q5JZY3 1008 aa25.36■■□□□ 1.65
LRCH3-208ENST00000443727 GLIS2Q9BZE0 524 aaPredicted RBP25.36■■□□□ 1.65
LRCH3-208ENST00000443727 SMC4Q9NTJ3 1288 aa25.36■■□□□ 1.65
LRCH3-208ENST00000443727 USP17L3A6NCW0 530 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 USP17L4A6NCW7 530 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 CHRNDQ07001 517 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 ALDH1L2Q3SY69 923 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 RSBN1LQ6PCB5 846 aaPredicted RBP25.35■■□□□ 1.65
LRCH3-208ENST00000443727 USP17L1Q7RTZ2 530 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 PGAP2Q9UHJ9 254 aa25.35■■□□□ 1.65
LRCH3-208ENST00000443727 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
LRCH3-208ENST00000443727 AGBL3Q8NEM8 1001 aa25.34■■□□□ 1.65
LRCH3-208ENST00000443727 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
LRCH3-208ENST00000443727 CDC37L1Q7L3B6 337 aa25.33■■□□□ 1.65
LRCH3-208ENST00000443727 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
LRCH3-208ENST00000443727 COA1Q9GZY4 146 aa25.33■■□□□ 1.65
LRCH3-208ENST00000443727 CT47B1P0C2W7 299 aaPredicted RBP25.32■■□□□ 1.64
LRCH3-208ENST00000443727 NBPF7P0C2Y1 421 aaPredicted RBP25.32■■□□□ 1.64
LRCH3-208ENST00000443727 VEGFBP49765 207 aa25.32■■□□□ 1.64
LRCH3-208ENST00000443727 KIF4BQ2VIQ3 1234 aa25.32■■□□□ 1.64
LRCH3-208ENST00000443727 LDHAL6AQ6ZMR3 332 aa25.32■■□□□ 1.64
LRCH3-208ENST00000443727 HELBQ8NG08 1087 aaPredicted RBP25.32■■□□□ 1.64
LRCH3-208ENST00000443727 SUCLG2Q96I99 432 aa25.32■■□□□ 1.64
LRCH3-208ENST00000443727 ZNF594Q96JF6 807 aaPredicted RBP25.32■■□□□ 1.64
LRCH3-208ENST00000443727 CNNM1Q9NRU3 951 aa25.32■■□□□ 1.64
LRCH3-208ENST00000443727 SCN9AQ15858 1988 aa25.31■■□□□ 1.64
LRCH3-208ENST00000443727 TAF5LO75529 589 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms