RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
PTPRE-203ENST00000442830 TBC1D16Q8TBP0 767 aa17.78■□□□□ 0.44
PTPRE-203ENST00000442830 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
PTPRE-203ENST00000442830 MYD88Q99836 296 aa17.78■□□□□ 0.44
PTPRE-203ENST00000442830 ANKIB1Q9P2G1 1089 aa17.78■□□□□ 0.44
PTPRE-203ENST00000442830 GGA1Q9UJY5 639 aa17.78■□□□□ 0.44
PTPRE-203ENST00000442830 HIRAP54198 1017 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 FMR1Q06787 632 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 NOGQ13253 232 aa17.77■□□□□ 0.44
PTPRE-203ENST00000442830 GRM1Q13255 1194 aa17.77■□□□□ 0.44
PTPRE-203ENST00000442830 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 METTL22Q9BUU2 404 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-203ENST00000442830 STK31Q9BXU1 1019 aa17.77■□□□□ 0.44
PTPRE-203ENST00000442830 RIMBP2O15034 1052 aa17.76■□□□□ 0.43
PTPRE-203ENST00000442830 UFL1O94874 794 aa17.76■□□□□ 0.43
PTPRE-203ENST00000442830 NEXNQ0ZGT2 675 aa17.76■□□□□ 0.43
PTPRE-203ENST00000442830 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
PTPRE-203ENST00000442830 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
PTPRE-203ENST00000442830 ZNF408Q9H9D4 720 aa17.76■□□□□ 0.43
PTPRE-203ENST00000442830 XDHP47989 1333 aa17.75■□□□□ 0.43
PTPRE-203ENST00000442830 VIL1P09327 827 aaKnown RBP17.75■□□□□ 0.43
PTPRE-203ENST00000442830 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
PTPRE-203ENST00000442830 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
PTPRE-203ENST00000442830 KRT26Q7Z3Y9 468 aa17.75■□□□□ 0.43
PTPRE-203ENST00000442830 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
PTPRE-203ENST00000442830 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
PTPRE-203ENST00000442830 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
PTPRE-203ENST00000442830 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
PTPRE-203ENST00000442830 ATP2B4P23634 1241 aa17.74■□□□□ 0.43
PTPRE-203ENST00000442830 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
PTPRE-203ENST00000442830 MMP14P50281 582 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 HUNKP57058 714 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 DOK7Q18PE1 504 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 TBC1D10BQ4KMP7 808 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-203ENST00000442830 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 SAMD7Q7Z3H4 446 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 RTL9Q8NET4 1388 aa17.73■□□□□ 0.43
PTPRE-203ENST00000442830 CTSWP56202 376 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 PODNQ7Z5L7 613 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 CCDC102AQ96A19 550 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 ABHD8Q96I13 439 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 GBA2Q9HCG7 927 aaPredicted RBP17.72■□□□□ 0.43
PTPRE-203ENST00000442830 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 AKAP11Q9UKA4 1901 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 IL16Q14005 1332 aa17.72■□□□□ 0.43
PTPRE-203ENST00000442830 COL4A1P02462 1669 aa17.71■□□□□ 0.43
PTPRE-203ENST00000442830 AOC2O75106 756 aa17.71■□□□□ 0.43
PTPRE-203ENST00000442830 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
PTPRE-203ENST00000442830 MED23Q9ULK4 1368 aa17.7■□□□□ 0.42
PTPRE-203ENST00000442830 SHTN1A0MZ66 631 aa17.7■□□□□ 0.42
PTPRE-203ENST00000442830 ZNF280AP59817 542 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-203ENST00000442830 RGMBQ6NW40 437 aa17.7■□□□□ 0.42
PTPRE-203ENST00000442830 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-203ENST00000442830 BSDC1Q9NW68 430 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-203ENST00000442830 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
PTPRE-203ENST00000442830 PITPNM2Q9BZ72 1349 aa17.7■□□□□ 0.42
PTPRE-203ENST00000442830 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
PTPRE-203ENST00000442830 FKBP1BP68106 108 aa17.69■□□□□ 0.42
PTPRE-203ENST00000442830 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
PTPRE-203ENST00000442830 SAGE1Q9NXZ1 904 aa17.69■□□□□ 0.42
PTPRE-203ENST00000442830 MYO3BQ8WXR4 1341 aa17.69■□□□□ 0.42
PTPRE-203ENST00000442830 CASP8AP2Q9UKL3 1982 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
PTPRE-203ENST00000442830 RBM26Q5T8P6 1007 aaKnown RBP17.68■□□□□ 0.42
PTPRE-203ENST00000442830 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 GGA3Q9NZ52 723 aa17.68■□□□□ 0.42
PTPRE-203ENST00000442830 PAPPA2Q9BXP8 1791 aa17.67■□□□□ 0.42
PTPRE-203ENST00000442830 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
PTPRE-203ENST00000442830 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
PTPRE-203ENST00000442830 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
PTPRE-203ENST00000442830 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 TSPYL6Q8N831 410 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 KCNQ5Q9NR82 932 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 LEMD3Q9Y2U8 911 aa17.66■□□□□ 0.42
PTPRE-203ENST00000442830 NEURL1BA8MQ27 555 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 EGFRP00533 1210 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 ANKRD2Q9GZV1 360 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 COA1Q9GZY4 146 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 MYOZ2Q9NPC6 264 aa17.65■□□□□ 0.42
PTPRE-203ENST00000442830 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
PTPRE-203ENST00000442830 CCT4P50991 539 aaKnown RBP17.64■□□□□ 0.41
PTPRE-203ENST00000442830 SCARF1Q14162 830 aa17.64■□□□□ 0.41
PTPRE-203ENST00000442830 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
PTPRE-203ENST00000442830 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms